Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
SHMT2P34897 RN7SKP17-201ENST00000411242 351 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 AL354868.1-201ENST00000417077 482 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 AC066692.1-201ENST00000421721 457 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.78□□□□□ -1.48
SHMT2P34897 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.78□□□□□ -1.48
SHMT2P34897 KIF4CP-201ENST00000422742 1279 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 KCTD9P1-201ENST00000430462 1167 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.78□□□□□ -1.48
SHMT2P34897 AL445928.1-201ENST00000435545 222 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 RPS3AP38-201ENST00000435889 763 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHMT2P34897 VN1R110P-201ENST00000438988 971 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 CUBNP2-201ENST00000443534 1139 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 RN7SL193P-201ENST00000491708 276 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 Y_RNA.667-201ENST00000516212 107 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.78□□□□□ -1.48
SHMT2P34897 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.78□□□□□ -1.48
SHMT2P34897 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.78□□□□□ -1.48
SHMT2P34897 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.78□□□□□ -1.48
SHMT2P34897 uc_338.26-201ENST00000612659 160 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 CASC19-260ENST00000641828 2001 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHMT2P34897 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHMT2P34897 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHMT2P34897 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHMT2P34897 AC092451.3-201ENST00000625067 1343 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHMT2P34897 AC083837.1-201ENST00000565297 2994 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHMT2P34897 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SHMT2P34897 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.77□□□□□ -1.49
SHMT2P34897 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHMT2P34897 SELENOWP1-201ENST00000322792 252 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 RNA5SP273-201ENST00000362484 113 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 RN7SKP128-201ENST00000364270 303 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 HMGN1P20-201ENST00000411849 300 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.77□□□□□ -1.49
SHMT2P34897 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.77□□□□□ -1.49
SHMT2P34897 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 TRGV5P-201ENST00000419915 354 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.77□□□□□ -1.49
SHMT2P34897 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHMT2P34897 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHMT2P34897 SDC4P-201ENST00000453285 601 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 ACA64.4-201ENST00000459070 127 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 ST13P12-201ENST00000508958 1094 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.77□□□□□ -1.49
SHMT2P34897 AC136777.2-201ENST00000522979 358 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.77□□□□□ -1.49
SHMT2P34897 AL365181.4-201ENST00000609800 547 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.77□□□□□ -1.49
SHMT2P34897 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 AL359742.1-201ENST00000622497 540 ntBASIC5.77□□□□□ -1.49
SHMT2P34897 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.77□□□□□ -1.49
SHMT2P34897 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
SHMT2P34897 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.77□□□□□ -1.49
SHMT2P34897 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
SHMT2P34897 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.76□□□□□ -1.49
SHMT2P34897 AC090220.1-201ENST00000593078 1699 ntBASIC5.76□□□□□ -1.49
SHMT2P34897 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.76□□□□□ -1.49
SHMT2P34897 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SHMT2P34897 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SHMT2P34897 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SHMT2P34897 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.76□□□□□ -1.49
SHMT2P34897 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.76□□□□□ -1.49
SHMT2P34897 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.76□□□□□ -1.49
SHMT2P34897 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.76□□□□□ -1.49
SHMT2P34897 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.76□□□□□ -1.49
SHMT2P34897 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.76□□□□□ -1.49
SHMT2P34897 AC093719.1-201ENST00000480427 441 ntBASIC5.76□□□□□ -1.49
SHMT2P34897 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms