Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC005363.1-201ENST00000530779 351 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC036111.2-201ENST00000533247 901 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC090888.3-201ENST00000558917 509 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 NDUFA5P11-201ENST00000567995 343 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 MRPS21P8-201ENST00000569196 235 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 AP001357.1-201ENST00000586304 1053 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC073333.2-201ENST00000603589 769 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC124916.2-201ENST00000604416 224 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMBP28068 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMBP28068 THAP12P9-201ENST00000503971 2360 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMBP28068 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMBP28068 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 AP000473.2-201ENST00000602659 1537 ntBASIC4.51□□□□□ -1.69
HLA-DMBP28068 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMBP28068 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DMBP28068 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC010266.2-201ENST00000564741 3255 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC130304.1-201ENST00000622942 2385 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC104966.1-201ENST00000467010 1464 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 MYL6P5-201ENST00000412707 459 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC002553.3-201ENST00000453002 341 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 OSTCP1-201ENST00000455507 450 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC104164.1-201ENST00000460282 590 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 NPM1P28-201ENST00000492269 840 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 CR383658.1-201ENST00000514609 734 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC020937.1-201ENST00000519677 1013 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 OR7E158P-201ENST00000524483 910 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 TXNP4-201ENST00000575018 310 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC002069.2-201ENST00000603580 883 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC091167.5-201ENST00000605689 894 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 AL645933.2-201ENST00000606743 1207 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 AC096861.1-201ENST00000616652 240 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 MIR6861-201ENST00000618657 64 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 AL512652.1-201ENST00000619006 500 ntBASIC4.5□□□□□ -1.69
HLA-DMBP28068 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMBP28068 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMBP28068 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 AC092451.3-201ENST00000625067 1343 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMBP28068 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMBP28068 SNORA21-201ENST00000362423 132 ntBASIC4.49□□□□□ -1.69
HLA-DMBP28068 RNU1-134P-201ENST00000362935 165 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms