Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC130365.2-201ENST00000525882 1201 ntBASIC6.56□□□□□ -1.36
BDNFP23560 KCTD9P4-201ENST00000526766 1166 ntBASIC6.56□□□□□ -1.36
BDNFP23560 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
BDNFP23560 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.56□□□□□ -1.36
BDNFP23560 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BDNFP23560 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.56□□□□□ -1.36
BDNFP23560 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.56□□□□□ -1.36
BDNFP23560 AC087888.1-201ENST00000550884 1254 ntBASIC6.56□□□□□ -1.36
BDNFP23560 AC018552.1-201ENST00000562099 811 ntBASIC6.56□□□□□ -1.36
BDNFP23560 AC092332.1-201ENST00000563684 829 ntBASIC6.56□□□□□ -1.36
BDNFP23560 MTATP6P25-201ENST00000574491 261 ntBASIC6.56□□□□□ -1.36
BDNFP23560 AC067852.5-201ENST00000589299 310 ntBASIC6.56□□□□□ -1.36
BDNFP23560 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.56□□□□□ -1.36
BDNFP23560 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 BMS1P7-201ENST00000602440 1052 ntBASIC6.56□□□□□ -1.36
BDNFP23560 HMGB1P51-201ENST00000605166 638 ntBASIC6.56□□□□□ -1.36
BDNFP23560 AC092266.1-201ENST00000610958 165 ntBASIC6.56□□□□□ -1.36
BDNFP23560 MIR6778-201ENST00000617912 73 ntBASIC6.56□□□□□ -1.36
BDNFP23560 AC092159.4-201ENST00000624944 550 ntBASIC6.56□□□□□ -1.36
BDNFP23560 MIR1910-201ENST00000636955 80 ntBASIC6.56□□□□□ -1.36
BDNFP23560 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
BDNFP23560 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BDNFP23560 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.56□□□□□ -1.36
BDNFP23560 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BDNFP23560 SPATA2P1-201ENST00000431223 2055 ntBASIC6.56□□□□□ -1.36
BDNFP23560 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BDNFP23560 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
BDNFP23560 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
BDNFP23560 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
BDNFP23560 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.56□□□□□ -1.36
BDNFP23560 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
BDNFP23560 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
BDNFP23560 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
BDNFP23560 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 AL391261.1-201ENST00000555712 1479 ntBASIC6.55□□□□□ -1.36
BDNFP23560 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
BDNFP23560 AC092724.1-201ENST00000624623 3397 ntBASIC6.55□□□□□ -1.36
BDNFP23560 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 AP001541.1-201ENST00000623322 1904 ntBASIC6.55□□□□□ -1.36
BDNFP23560 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.55□□□□□ -1.36
BDNFP23560 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
BDNFP23560 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
BDNFP23560 SNORA21-201ENST00000362423 132 ntBASIC6.55□□□□□ -1.36
BDNFP23560 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
BDNFP23560 MIR130B-202ENST00000385018 82 ntBASIC6.55□□□□□ -1.36
BDNFP23560 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.55□□□□□ -1.36
BDNFP23560 OR6K4P-201ENST00000423179 955 ntBASIC6.55□□□□□ -1.36
BDNFP23560 RPL23AP4-201ENST00000427757 463 ntBASIC6.55□□□□□ -1.36
BDNFP23560 RPL6P30-201ENST00000443382 862 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.55□□□□□ -1.36
BDNFP23560 HMGN1P2-201ENST00000445197 310 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AC022431.1-201ENST00000450941 438 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AC002553.3-201ENST00000453002 341 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AC002553.2-201ENST00000453217 340 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AC068228.1-201ENST00000461723 211 ntBASIC6.55□□□□□ -1.36
BDNFP23560 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.55□□□□□ -1.36
BDNFP23560 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.55□□□□□ -1.36
BDNFP23560 LARP7P4-201ENST00000481075 878 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AL158068.1-201ENST00000506116 616 ntBASIC6.55□□□□□ -1.36
BDNFP23560 CR383658.1-201ENST00000514609 734 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AC021269.1-201ENST00000526860 705 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AC027667.1-201ENST00000545814 304 ntBASIC6.55□□□□□ -1.36
BDNFP23560 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.55□□□□□ -1.36
BDNFP23560 AC090826.1-203ENST00000569235 490 ntBASIC6.55□□□□□ -1.36
BDNFP23560 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.55□□□□□ -1.36
BDNFP23560 AC004801.6-201ENST00000616571 978 ntBASIC6.55□□□□□ -1.36
BDNFP23560 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.55□□□□□ -1.36
BDNFP23560 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.55□□□□□ -1.36
BDNFP23560 OR7A1P-202ENST00000641542 1158 ntBASIC6.55□□□□□ -1.36
BDNFP23560 AC093849.1-201ENST00000563631 2209 ntBASIC6.55□□□□□ -1.36
BDNFP23560 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
BDNFP23560 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.55□□□□□ -1.36
BDNFP23560 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.55□□□□□ -1.36
BDNFP23560 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
BDNFP23560 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.54□□□□□ -1.36
BDNFP23560 IMMTP1-201ENST00000435590 2219 ntBASIC6.54□□□□□ -1.36
BDNFP23560 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
BDNFP23560 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.54□□□□□ -1.36
BDNFP23560 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.54□□□□□ -1.36
BDNFP23560 AC022034.1-201ENST00000512867 2156 ntBASIC6.54□□□□□ -1.36
BDNFP23560 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
BDNFP23560 AC092070.2-203ENST00000598377 3644 ntBASIC6.54□□□□□ -1.36
BDNFP23560 AC011815.2-201ENST00000618230 2021 ntBASIC6.54□□□□□ -1.36
BDNFP23560 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms