Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC117394.1-201ENST00000477323 567 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC098583.1-201ENST00000480875 255 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 OR4A6P-201ENST00000534364 970 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC092266.1-201ENST00000610958 165 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 uc_338.26-201ENST00000612659 160 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AL355974.3-201ENST00000617383 467 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 RBPJP7-201ENST00000442803 1447 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 RBPJP5-201ENST00000449433 1447 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC022164.1-201ENST00000568767 2673 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 MTCO1P22-201ENST00000604619 1360 ntBASIC6.04□□□□□ -1.44
HLA-DPA1P20036 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
HLA-DPA1P20036 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC104966.1-201ENST00000467010 1464 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 SAMMSON-210ENST00000641260 1308 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC020656.2-201ENST00000613291 5309 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 IFIT1P1-201ENST00000400497 1449 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 GNG5P2-201ENST00000372054 207 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 REREP1Y-201ENST00000422655 198 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC099677.3-201ENST00000427081 395 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 REREP2Y-201ENST00000439103 200 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AL138899.2-201ENST00000439139 499 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AL158068.1-201ENST00000506116 616 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 ASNSP4-201ENST00000511103 447 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 RN7SKP35-201ENST00000517210 151 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 IGKV3D-25-201ENST00000519599 235 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 TOMM20P1-201ENST00000534518 427 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC125494.2-201ENST00000602431 657 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AP001437.1-201ENST00000608783 456 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.03□□□□□ -1.44
HLA-DPA1P20036 ZNF402P-201ENST00000404435 3100 ntBASIC6.03□□□□□ -1.44
HLA-DPA1P20036 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 AC093225.1-201ENST00000506867 1408 ntBASIC6.02□□□□□ -1.45
HLA-DPA1P20036 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 RNA5SP433-201ENST00000364491 114 ntBASIC6.02□□□□□ -1.45
HLA-DPA1P20036 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 SNRPEP6-201ENST00000407465 277 ntBASIC6.02□□□□□ -1.45
HLA-DPA1P20036 PTP4A1P1-201ENST00000420539 515 ntBASIC6.02□□□□□ -1.45
HLA-DPA1P20036 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.02□□□□□ -1.45
HLA-DPA1P20036 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms