Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC9.64□□□□□ -0.87
CFTRP13569 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CFTRP13569 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
CFTRP13569 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.64□□□□□ -0.87
CFTRP13569 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CFTRP13569 MALAT1-202ENST00000534336 8708 ntBASIC9.63□□□□□ -0.87
CFTRP13569 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CFTRP13569 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC9.63□□□□□ -0.87
CFTRP13569 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.63□□□□□ -0.87
CFTRP13569 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CFTRP13569 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
CFTRP13569 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CFTRP13569 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CFTRP13569 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC9.63□□□□□ -0.87
CFTRP13569 CDC123-202ENST00000378900 933 ntTSL 5 BASIC9.63□□□□□ -0.87
CFTRP13569 RPL23AP18-201ENST00000416139 468 ntBASIC9.63□□□□□ -0.87
CFTRP13569 PPP2R2DP1-201ENST00000420526 637 ntBASIC9.63□□□□□ -0.87
CFTRP13569 SRSF1P1-201ENST00000424058 520 ntBASIC9.63□□□□□ -0.87
CFTRP13569 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CFTRP13569 RPS3AP38-201ENST00000435889 763 ntBASIC9.63□□□□□ -0.87
CFTRP13569 RPS3AP53-201ENST00000454716 778 ntBASIC9.63□□□□□ -0.87
CFTRP13569 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC9.63□□□□□ -0.87
CFTRP13569 AC068522.1-201ENST00000482895 345 ntBASIC9.63□□□□□ -0.87
CFTRP13569 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC9.63□□□□□ -0.87
CFTRP13569 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC9.63□□□□□ -0.87
CFTRP13569 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC9.63□□□□□ -0.87
CFTRP13569 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CFTRP13569 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CFTRP13569 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC9.63□□□□□ -0.87
CFTRP13569 AC104447.1-201ENST00000624214 2124 ntBASIC9.63□□□□□ -0.87
CFTRP13569 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CFTRP13569 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CFTRP13569 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CFTRP13569 CASC19-281ENST00000642118 1554 ntBASIC9.62□□□□□ -0.87
CFTRP13569 GNAS-202ENST00000306090 477 ntTSL 5 BASIC9.62□□□□□ -0.87
CFTRP13569 RNU1-149P-201ENST00000390870 161 ntBASIC9.62□□□□□ -0.87
CFTRP13569 AC016027.5-201ENST00000427227 210 ntBASIC9.62□□□□□ -0.87
CFTRP13569 FAM96AP1-201ENST00000430879 482 ntBASIC9.62□□□□□ -0.87
CFTRP13569 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC9.62□□□□□ -0.87
CFTRP13569 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC9.62□□□□□ -0.87
CFTRP13569 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC9.62□□□□□ -0.87
CFTRP13569 RPS23P2-201ENST00000463671 415 ntBASIC9.62□□□□□ -0.87
CFTRP13569 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC9.62□□□□□ -0.87
CFTRP13569 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC9.62□□□□□ -0.87
CFTRP13569 HMGB1P40-201ENST00000525121 540 ntBASIC9.62□□□□□ -0.87
CFTRP13569 AC011447.4-201ENST00000587562 111 ntBASIC9.62□□□□□ -0.87
CFTRP13569 AC095055.1-201ENST00000603472 1113 ntBASIC9.62□□□□□ -0.87
CFTRP13569 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC9.62□□□□□ -0.87
CFTRP13569 CYP4F35P-202ENST00000636121 390 ntBASIC9.62□□□□□ -0.87
CFTRP13569 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CFTRP13569 AL121768.1-201ENST00000613917 2544 ntBASIC9.62□□□□□ -0.87
CFTRP13569 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
CFTRP13569 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
CFTRP13569 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC9.62□□□□□ -0.87
CFTRP13569 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.62□□□□□ -0.87
CFTRP13569 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CFTRP13569 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CFTRP13569 AC009831.5-201ENST00000624000 3189 ntBASIC9.62□□□□□ -0.87
CFTRP13569 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 OR9K1P-202ENST00000641111 3217 ntBASIC9.61□□□□□ -0.87
CFTRP13569 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CFTRP13569 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.61□□□□□ -0.87
CFTRP13569 PWAR1-201ENST00000624188 2414 ntBASIC9.61□□□□□ -0.87
CFTRP13569 ADIG-201ENST00000373348 430 ntTSL 2 BASIC9.61□□□□□ -0.87
CFTRP13569 AL035419.1-201ENST00000397037 564 ntBASIC9.61□□□□□ -0.87
CFTRP13569 CEACAMP9-201ENST00000442990 513 ntBASIC9.61□□□□□ -0.87
CFTRP13569 AC011753.3-201ENST00000443436 406 ntBASIC9.61□□□□□ -0.87
CFTRP13569 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC9.61□□□□□ -0.87
CFTRP13569 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC9.61□□□□□ -0.87
CFTRP13569 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC9.61□□□□□ -0.87
CFTRP13569 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC9.61□□□□□ -0.87
CFTRP13569 AC139697.1-201ENST00000548429 745 ntBASIC9.61□□□□□ -0.87
CFTRP13569 DPPA3P2-202ENST00000557188 1219 ntBASIC9.61□□□□□ -0.87
CFTRP13569 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
CFTRP13569 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.61□□□□□ -0.87
CFTRP13569 AC234771.5-201ENST00000600161 514 ntBASIC9.61□□□□□ -0.87
CFTRP13569 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC9.61□□□□□ -0.87
CFTRP13569 TEX41-254ENST00000626394 423 ntTSL 5 BASIC9.61□□□□□ -0.87
CFTRP13569 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
CFTRP13569 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CFTRP13569 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
CFTRP13569 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
CFTRP13569 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CFTRP13569 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CFTRP13569 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.6□□□□□ -0.87
CFTRP13569 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFTRP13569 POT1-202ENST00000393329 3950 ntTSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms