Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RPS7P6-201ENST00000485777 579 ntBASIC6.84□□□□□ -1.32
COL4A1P02462 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.84□□□□□ -1.32
COL4A1P02462 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.84□□□□□ -1.32
COL4A1P02462 OR1F2P-201ENST00000570470 933 ntBASIC6.84□□□□□ -1.32
COL4A1P02462 MIR6837-201ENST00000620884 64 ntBASIC6.84□□□□□ -1.32
COL4A1P02462 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL4A1P02462 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL4A1P02462 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 ZNF101P1-201ENST00000435701 1720 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A1P02462 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 AC103591.2-201ENST00000265259 766 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 RN7SKP125-201ENST00000410481 302 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 RN7SKP216-201ENST00000411050 312 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 RPL23AP18-201ENST00000416139 468 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 RPS3AP38-201ENST00000435889 763 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 RPL7P61-201ENST00000451721 751 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 AC091685.2-201ENST00000454924 864 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 RNU1-88P-201ENST00000459274 128 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 SNORA26.10-201ENST00000516427 141 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL4A1P02462 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A1P02462 AC007346.2-201ENST00000564816 892 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A1P02462 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 MIR6798-201ENST00000612887 67 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 AC037198.3-201ENST00000616754 526 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 WBP11P1-201ENST00000562560 1931 ntBASIC6.83□□□□□ -1.32
COL4A1P02462 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
COL4A1P02462 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
COL4A1P02462 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A1P02462 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 AL133388.1-201ENST00000404509 287 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 SLC35E1P1-201ENST00000419313 864 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 RPS17P17-201ENST00000419392 409 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A1P02462 SRSF1P1-201ENST00000424058 520 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 OSTCP1-201ENST00000455507 450 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A1P02462 RPS17P5-201ENST00000498293 408 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A1P02462 AL121594.2-201ENST00000541658 472 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A1P02462 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.82□□□□□ -1.32
COL4A1P02462 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 AC087783.2-201ENST00000605070 562 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 AC133644.2-201ENST00000608142 540 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 MRRFP1-201ENST00000435941 1675 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 DOCK11P1-201ENST00000553480 5932 ntBASIC6.82□□□□□ -1.32
COL4A1P02462 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
COL4A1P02462 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A1P02462 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL4A1P02462 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A1P02462 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A1P02462 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 AC005294.1-201ENST00000355509 281 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 RN7SKP104-201ENST00000362605 328 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 MIR223-201ENST00000385204 110 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.81□□□□□ -1.32
COL4A1P02462 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 RPS23P2-201ENST00000463671 415 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms