Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC067904.2-201ENST00000517322 1283 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 MTND1P36-201ENST00000522384 936 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AP000620.1-201ENST00000527147 504 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AP001804.2-201ENST00000533932 910 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AC134349.2-201ENST00000535136 910 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL049779.3-201ENST00000557141 606 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AC002519.2-203ENST00000567043 837 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.62□□□□□ -1.51
NKX2-2O95096 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL645933.2-201ENST00000606743 1207 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 MIR6721-201ENST00000617181 87 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 RMST_5.1-201ENST00000618704 126 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AL512652.1-201ENST00000619006 500 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AC025262.3-201ENST00000623666 360 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NKX2-2O95096 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AC068446.1-201ENST00000556425 1549 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AC245100.2-201ENST00000454544 1679 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NKX2-2O95096 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX2-2O95096 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NKX2-2O95096 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX2-2O95096 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NKX2-2O95096 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 RNU1-134P-201ENST00000362935 165 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 RNU6-40P-201ENST00000384254 107 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 AL132875.1-201ENST00000403623 949 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 AL096800.1-201ENST00000405326 893 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX2-2O95096 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX2-2O95096 DSTNP5-201ENST00000427921 523 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.61□□□□□ -1.51
NKX2-2O95096 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AL365220.1-201ENST00000432923 399 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 RPL5P7-201ENST00000444235 813 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 AC016027.4-201ENST00000450866 277 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 HMGB1P7-201ENST00000450921 612 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX2-2O95096 CYCSP53-201ENST00000455540 265 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 MTND6P32-201ENST00000457611 483 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AC115223.1-201ENST00000466377 870 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 CCDC11P1-201ENST00000503137 1162 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 AC018797.1-201ENST00000510791 255 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 HMGB1P47-201ENST00000511281 589 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX2-2O95096 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX2-2O95096 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX2-2O95096 OR56A7P-201ENST00000524865 941 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AC244502.2-201ENST00000543361 851 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AC018558.5-201ENST00000565840 952 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 PRELID3BP3-201ENST00000584963 545 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
NKX2-2O95096 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX2-2O95096 AL355802.4-201ENST00000607635 548 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX2-2O95096 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NKX2-2O95096 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-2O95096 AC015722.2-201ENST00000622210 551 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 AC079298.2-201ENST00000623885 459 ntBASIC5.61□□□□□ -1.51
NKX2-2O95096 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
NKX2-2O95096 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms