Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.57□□□□□ -1.52
SSX4O60224 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.57□□□□□ -1.52
SSX4O60224 NPIPB14P-203ENST00000532298 987 ntBASIC5.57□□□□□ -1.52
SSX4O60224 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.57□□□□□ -1.52
SSX4O60224 NPM1P42-201ENST00000560329 862 ntBASIC5.57□□□□□ -1.52
SSX4O60224 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.57□□□□□ -1.52
SSX4O60224 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 AC104307.1-201ENST00000616142 196 ntBASIC5.57□□□□□ -1.52
SSX4O60224 HPVC1-201ENST00000629899 1198 ntBASIC5.57□□□□□ -1.52
SSX4O60224 MAPK10-350ENST00000641777 965 ntBASIC5.57□□□□□ -1.52
SSX4O60224 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
SSX4O60224 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.57□□□□□ -1.52
SSX4O60224 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.57□□□□□ -1.52
SSX4O60224 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.57□□□□□ -1.52
SSX4O60224 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 AC125238.2-201ENST00000430003 1440 ntBASIC5.57□□□□□ -1.52
SSX4O60224 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 PARP4P2-201ENST00000446672 3326 ntBASIC5.56□□□□□ -1.52
SSX4O60224 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 AL353625.1-202ENST00000366273 571 ntBASIC5.56□□□□□ -1.52
SSX4O60224 RNU6-152P-201ENST00000384037 107 ntBASIC5.56□□□□□ -1.52
SSX4O60224 MIR188-201ENST00000385034 86 ntBASIC5.56□□□□□ -1.52
SSX4O60224 MIR323B-201ENST00000385269 82 ntBASIC5.56□□□□□ -1.52
SSX4O60224 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 RN7SKP17-201ENST00000411242 351 ntBASIC5.56□□□□□ -1.52
SSX4O60224 GABARAPL3-201ENST00000412799 354 ntBASIC5.56□□□□□ -1.52
SSX4O60224 CYCSP52-201ENST00000422857 310 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AL590623.1-201ENST00000427864 105 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.56□□□□□ -1.52
SSX4O60224 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 AL390879.1-201ENST00000439143 386 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 AL606490.8-201ENST00000441624 319 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 AC144530.1-201ENST00000452862 555 ntBASIC5.56□□□□□ -1.52
SSX4O60224 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 AC108751.3-201ENST00000461814 1020 ntBASIC5.56□□□□□ -1.52
SSX4O60224 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 AC091874.2-201ENST00000505889 720 ntBASIC5.56□□□□□ -1.52
SSX4O60224 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 CYCSP25-201ENST00000525280 316 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 AL731537.2-201ENST00000561565 951 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.56□□□□□ -1.52
SSX4O60224 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 AC027281.1-201ENST00000574178 758 ntBASIC5.56□□□□□ -1.52
SSX4O60224 RN7SL208P-201ENST00000577964 296 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 AL049840.5-201ENST00000602827 552 ntBASIC5.56□□□□□ -1.52
SSX4O60224 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AL021368.3-201ENST00000607119 578 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AC015982.1-201ENST00000608113 465 ntBASIC5.56□□□□□ -1.52
SSX4O60224 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.56□□□□□ -1.52
SSX4O60224 AC018692.2-201ENST00000624130 348 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.56□□□□□ -1.52
SSX4O60224 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 AC093909.5-201ENST00000621839 1799 ntBASIC5.56□□□□□ -1.52
SSX4O60224 AC023245.2-201ENST00000530760 2978 ntBASIC5.56□□□□□ -1.52
SSX4O60224 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.56□□□□□ -1.52
SSX4O60224 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SSX4O60224 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSX4O60224 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SSX4O60224 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms