Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 OR51C1P-201ENST00000608504 942 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AL136097.3-201ENST00000611097 505 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 RNA5SP110-201ENST00000362638 115 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 RNU6-1251P-201ENST00000364502 107 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 RNA5SP105-201ENST00000391123 113 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AL121977.1-201ENST00000401636 979 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 RPL7AP51-201ENST00000422016 760 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC106901.1-201ENST00000425086 698 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 RNF19BPX-201ENST00000426224 625 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 OR3D1P-201ENST00000438288 955 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 ZNF619P1-201ENST00000446539 752 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC097359.1-201ENST00000447946 463 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 CCRL1P1-201ENST00000449542 1053 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 RN7SL552P-201ENST00000462094 276 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 PCNAP1-201ENST00000505363 709 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 RNU6-491P-201ENST00000516099 110 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC116917.1-201ENST00000520558 305 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC244502.2-201ENST00000543361 851 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AL049779.3-201ENST00000557141 606 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AP005136.2-201ENST00000583253 1049 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 WBP1LP11-201ENST00000586141 328 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC119403.2-201ENST00000590960 598 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC067838.1-201ENST00000606064 577 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC093388.1-201ENST00000609166 430 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AL080312.2-201ENST00000613001 630 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC015819.1-201ENST00000613588 663 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AL354696.1-201ENST00000614652 497 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC104307.1-201ENST00000616142 196 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 AP000550.3-201ENST00000637734 379 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AP001153.1-201ENST00000641024 338 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 AC003973.3-201ENST00000624863 2822 ntBASIC4.87□□□□□ -1.63
SRRM4A7MD48 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.87□□□□□ -1.63
SRRM4A7MD48 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SRRM4A7MD48 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SRRM4A7MD48 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.86□□□□□ -1.63
SRRM4A7MD48 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms