Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 OR52B5P-204ENST00000641744 3467 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 RNU6-152P-201ENST00000384037 107 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 SNRPEP6-201ENST00000407465 277 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 RPL35AP3-201ENST00000414680 288 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC096644.3-201ENST00000416788 338 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC092865.3-201ENST00000425390 1026 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 GAPDHP59-201ENST00000435908 267 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AL663074.2-201ENST00000440621 479 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AL691517.1-201ENST00000440833 1235 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 RPS7P3-201ENST00000443360 580 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC010240.2-201ENST00000445363 1205 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 PPIAP7-201ENST00000454070 489 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 IGKV2-19-201ENST00000518132 283 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 NPM1P52-201ENST00000518264 846 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AP000620.1-201ENST00000527147 504 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC134349.2-201ENST00000535136 910 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC090826.1-203ENST00000569235 490 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 MIR4420-201ENST00000583944 77 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC073111.2-201ENST00000605657 1075 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC097372.4-201ENST00000625025 466 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AL590396.2-201ENST00000636511 1041 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 MAPK10-270ENST00000641102 3538 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC093297.3-201ENST00000607056 2517 ntBASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 CUL4AP1-201ENST00000514750 1863 ntBASIC6.02□□□□□ -1.44
TCRBV7S3A2A0A539 AL137058.3-201ENST00000624531 3099 ntBASIC6.02□□□□□ -1.44
TCRBV7S3A2A0A539 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AL096711.1-201ENST00000404780 554 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC130360.1-201ENST00000425489 1117 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC099677.3-201ENST00000427081 395 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 RPSAP32-201ENST00000432681 526 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 RPSAP40-201ENST00000442343 891 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 RPL5P10-201ENST00000445207 894 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 RN7SL269P-201ENST00000467795 305 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 RNA5SP441-201ENST00000516809 88 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC009879.1-201ENST00000520029 839 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC130365.2-201ENST00000525882 1201 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms