Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.41□□□□□ -1.38
SNX9Q9Y5X1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 SELENOWP1-201ENST00000322792 252 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 SNORA11.3-201ENST00000408471 128 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 HMGN1P20-201ENST00000411849 300 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 RANP7-201ENST00000418085 644 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 BX284632.2-201ENST00000421091 399 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 CDY8P-201ENST00000428380 1279 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AC079807.1-201ENST00000429993 481 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 TUBB4BP6-201ENST00000437576 479 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL136455.1-201ENST00000441083 1240 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL512605.1-202ENST00000441919 381 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 RPS7P3-201ENST00000443360 580 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL359955.2-201ENST00000445380 353 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 CDY20P-201ENST00000447528 1279 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AC144530.1-201ENST00000452862 555 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 SDC4P-201ENST00000453285 601 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 GEMIN2P1-201ENST00000454246 752 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 ACA64.4-201ENST00000459070 127 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AC107993.1-201ENST00000591343 684 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL136131.3-201ENST00000607600 188 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 SNORA11.6-201ENST00000619030 128 ntBASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.4□□□□□ -1.38
SNX9Q9Y5X1 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SNX9Q9Y5X1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SNX9Q9Y5X1 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.4□□□□□ -1.39
SNX9Q9Y5X1 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SNX9Q9Y5X1 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SNX9Q9Y5X1 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC015977.1-201ENST00000418887 292 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 IPPKP1-201ENST00000422501 768 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 KIF4CP-201ENST00000422742 1279 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AL731534.1-201ENST00000434711 269 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AL445928.1-201ENST00000435545 222 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 RPL12P24-201ENST00000474907 486 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 SNORA48.9-201ENST00000516419 162 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 RNU6-551P-201ENST00000516661 103 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AP004609.2-201ENST00000532177 190 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AP003072.5-201ENST00000623872 773 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC132825.8-201ENST00000640783 297 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNX9Q9Y5X1 AC027088.4-201ENST00000611559 1947 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 PARP4P2-201ENST00000446672 3326 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 BRAFP1-201ENST00000445336 2703 ntBASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNX9Q9Y5X1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 257 ms