Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC104964.3-201ENST00000606115 2860 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC097063.1-201ENST00000426714 1797 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 FBXL21-201ENST00000297158 1305 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 EIF3EP1-201ENST00000433978 1316 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC119674.1-202ENST00000641333 1860 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 MIR27A-201ENST00000385073 78 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC010740.1-201ENST00000417035 684 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AL672212.1-201ENST00000422246 400 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 SNRPFP2-201ENST00000440710 251 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 RPS10P14-201ENST00000440748 502 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 COX4I1P2-201ENST00000447446 547 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC099670.1-201ENST00000455141 783 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC104164.1-201ENST00000460282 590 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 RN7SL104P-201ENST00000498686 293 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC105391.1-201ENST00000503155 1045 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC026782.2-201ENST00000510845 636 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 GAPDHP62-201ENST00000515313 990 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 RNA5SP434-201ENST00000516647 121 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 MIR2117-201ENST00000516780 80 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 MTND2P17-201ENST00000550281 688 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 FCGR1CP-201ENST00000579737 1127 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC026898.1-201ENST00000586404 571 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC087468.1-201ENST00000604365 630 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AC015660.5-201ENST00000623238 564 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 MIPEPP2-201ENST00000422560 1819 ntBASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.78□□□□□ -1.64
RCL1Q9Y2P8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.78□□□□□ -1.65
RCL1Q9Y2P8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 AL360270.2-201ENST00000562952 5985 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 MTND5P23-201ENST00000430812 1655 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 RN7SKP78-201ENST00000364711 318 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 AC003045.1-201ENST00000398779 713 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 OR52N3P-201ENST00000413417 934 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 AL096829.1-201ENST00000413677 457 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 MGAT2P2-201ENST00000427194 797 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 AL592114.2-201ENST00000440142 532 ntBASIC4.77□□□□□ -1.65
RCL1Q9Y2P8 CXCR2P1-202ENST00000443392 1074 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms