Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 EEF1A1P21-201ENST00000512363 1344 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 PSMC1P4-201ENST00000515236 1327 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 EEF1A1P26-201ENST00000458319 1363 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 HSPD1P1-201ENST00000503199 1726 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC017104.4-201ENST00000636283 1592 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AP005139.1-201ENST00000580702 1647 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RPL24P7-201ENST00000399435 453 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MIR1302-11-201ENST00000408051 138 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MIR1302-9-201ENST00000408365 138 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MIR1302-10-201ENST00000408734 138 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RN7SKP148-201ENST00000410179 275 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RN7SKP33-201ENST00000410942 340 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MTATP6P29-201ENST00000415057 132 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AL157698.1-201ENST00000415190 1011 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 UBTFL3-201ENST00000418934 1024 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 DNAJA1P2-201ENST00000421360 1197 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MTCO1P43-201ENST00000431831 488 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 FABP5P3-201ENST00000437960 408 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AL161626.1-201ENST00000441480 490 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AL020997.1-201ENST00000446554 349 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC093799.1-201ENST00000452411 499 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RPL31P11-202ENST00000454082 372 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RN7SL372P-201ENST00000461982 298 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AP002371.1-201ENST00000463604 433 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RPSAP48-201ENST00000466509 889 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RN7SL868P-201ENST00000485915 303 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC147055.4-201ENST00000504399 745 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MTND2P33-201ENST00000506452 1031 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 SNORA20.3-201ENST00000516880 132 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AP002004.1-206ENST00000532441 876 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC024405.1-201ENST00000532521 1042 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC107958.1-201ENST00000556576 290 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AL360085.1-201ENST00000604713 532 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MIR1302-2-201ENST00000607096 138 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AP002345.2-201ENST00000609961 904 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 AF246928.1-201ENST00000623768 87 ntBASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PDZRN3Q9UPQ7 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms