Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC034205.1-201ENST00000520621 638 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 GCSHP4-201ENST00000538792 439 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AL627230.1-201ENST00000613077 211 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AL356752.1-201ENST00000615844 593 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AL591926.8-201ENST00000616876 211 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 INTS6P1-201ENST00000504674 2530 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC005034.3-201ENST00000604845 1747 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 PARP4P1-201ENST00000435945 2337 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC211486.3-201ENST00000412694 621 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 NPM1P40-201ENST00000412758 733 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 BZW1P1-201ENST00000454901 1240 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AP002373.2-201ENST00000541631 1060 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC011453.2-201ENST00000603737 729 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 AC005084.1-201ENST00000605160 304 ntBASIC5.82□□□□□ -1.48
CHD7Q9P2D1 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AL034549.2-201ENST00000618285 3373 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 RPL10P10-201ENST00000403509 664 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AC234781.3-201ENST00000452540 973 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 NDUFA12P1-201ENST00000455914 406 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 BGLT3-201ENST00000564523 994 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AC068587.1-201ENST00000483613 781 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 IGBP1P5-201ENST00000507524 1000 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AC105384.2-201ENST00000508433 640 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AC112694.2-201ENST00000623697 768 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AC016717.3-201ENST00000624730 554 ntBASIC5.81□□□□□ -1.48
CHD7Q9P2D1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 TNC-210ENST00000535648 7508 ntTSL 5 BASIC5.81□□□□□ -1.48
CHD7Q9P2D1 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AL731556.1-201ENST00000394628 3711 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AC012512.1-201ENST00000446594 718 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 AC004890.3-201ENST00000605566 1095 ntBASIC5.8□□□□□ -1.48
CHD7Q9P2D1 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD7Q9P2D1 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms