Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 Y_RNA.529-201ENST00000384586 119 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RNU6-1263P-201ENST00000384601 106 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RNU6-907P-201ENST00000390924 102 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC017104.2-201ENST00000417000 321 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RPL21P43-201ENST00000425440 472 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 ZNF887P-201ENST00000431363 1407 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 TMX2P1-201ENST00000436507 708 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AL450263.2-201ENST00000439400 589 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AL021939.1-201ENST00000441868 886 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 BRAFP1-201ENST00000445336 2703 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC011352.3-201ENST00000505162 593 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 OR5M14P-201ENST00000506803 618 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC091133.4-201ENST00000511142 308 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RN7SKP14-201ENST00000516000 329 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RNA5SP75-201ENST00000516841 111 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AP000445.1-201ENST00000526692 741 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 FTH1-207ENST00000532601 742 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 OR7E1P-201ENST00000533891 958 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 OR4K7P-201ENST00000580232 945 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RN7SL840P-201ENST00000606883 284 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AL050343.2-201ENST00000607338 280 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 MIR6731-201ENST00000614863 72 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 PFN1P2-202ENST00000621347 397 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AL034408.1-201ENST00000637712 664 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
CUEDC1Q9NWM3 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
CUEDC1Q9NWM3 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
CUEDC1Q9NWM3 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CUEDC1Q9NWM3 AL031123.2-201ENST00000563225 3325 ntBASIC7.65□□□□□ -1.19
CUEDC1Q9NWM3 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CUEDC1Q9NWM3 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
CUEDC1Q9NWM3 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
CUEDC1Q9NWM3 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 AC106872.5-201ENST00000508856 1416 ntBASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 SNORA71D-201ENST00000363484 134 ntBASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 RNU6-549P-201ENST00000384433 107 ntBASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 NHP2P2-201ENST00000396362 460 ntBASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 COX6A1P3-201ENST00000404167 293 ntBASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.64□□□□□ -1.19
CUEDC1Q9NWM3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms