Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 MRPS33P4-201ENST00000434892 317 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 RPL31P20-201ENST00000449593 360 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 AL353718.1-201ENST00000451028 517 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 RPL5P12-201ENST00000477071 851 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 MIR3189-201ENST00000578735 73 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 MIR1273E-201ENST00000581165 102 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 AC024587.1-201ENST00000505925 2157 ntBASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 AC022905.1-201ENST00000503430 3048 ntBASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
RTFDC1Q9BY42 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AL161901.1-201ENST00000624954 3425 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AC068446.1-201ENST00000556425 1549 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 CASC19-243ENST00000641588 1546 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 PDZK1P1-202ENST00000425209 1350 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 RN7SKP162-201ENST00000363605 345 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 RNU6-152P-201ENST00000384037 107 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 MIR433-201ENST00000384837 93 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AC007068.1-201ENST00000396690 844 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 UBE2V1P15-201ENST00000407776 448 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 RPS6P14-201ENST00000425165 719 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 NPM1P26-201ENST00000426339 738 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AC127526.2-201ENST00000426436 775 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AL390879.2-203ENST00000426943 1121 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AL627308.1-201ENST00000435693 821 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 TXNP2-201ENST00000443918 295 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 RN7SL799P-201ENST00000475891 298 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 MTND3P24-201ENST00000506306 329 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AC138866.2-201ENST00000508650 584 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 MIR4505-201ENST00000582238 73 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AL391262.2-201ENST00000622466 494 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AL691477.1-201ENST00000624398 162 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AL138960.2-201ENST00000625145 535 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 AL731556.1-201ENST00000394628 3711 ntBASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
RTFDC1Q9BY42 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms