Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 RNA5SP333-201ENST00000363466 118 ntBASIC8.74□□□□□ -1.01
SCAPERQ9BY12 RNA5SP334-201ENST00000364825 118 ntBASIC8.74□□□□□ -1.01
SCAPERQ9BY12 MYL6P5-201ENST00000412707 459 ntBASIC8.74□□□□□ -1.01
SCAPERQ9BY12 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 VDAC2P4-201ENST00000452925 711 ntBASIC8.74□□□□□ -1.01
SCAPERQ9BY12 AL035090.1-201ENST00000454835 332 ntBASIC8.74□□□□□ -1.01
SCAPERQ9BY12 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 RPL38P3-201ENST00000484463 213 ntBASIC8.74□□□□□ -1.01
SCAPERQ9BY12 RN7SKP66-201ENST00000516681 231 ntBASIC8.74□□□□□ -1.01
SCAPERQ9BY12 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
SCAPERQ9BY12 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AOX3P-204ENST00000491025 2107 ntBASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC137056.2-201ENST00000624055 1958 ntBASIC8.73□□□□□ -1.01
SCAPERQ9BY12 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 RN7SKP28-201ENST00000364770 305 ntBASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AL390774.1-201ENST00000411924 246 ntBASIC8.73□□□□□ -1.01
SCAPERQ9BY12 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AL451136.1-201ENST00000435399 325 ntBASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC023141.8-201ENST00000442554 208 ntBASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 RAB28P2-201ENST00000454299 641 ntBASIC8.73□□□□□ -1.01
SCAPERQ9BY12 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC126915.2-201ENST00000610957 190 ntBASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
SCAPERQ9BY12 AC005294.1-201ENST00000355509 281 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 FABP12P1-201ENST00000401911 322 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 RPS26P13-201ENST00000419030 330 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 RN7SL570P-201ENST00000484405 292 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 AP000676.2-201ENST00000529711 301 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 AC022832.1-201ENST00000530718 645 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 AC027667.1-201ENST00000545814 304 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 OR11J2P-201ENST00000555298 907 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 ELOCP28-201ENST00000590044 317 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 AC079414.3-201ENST00000612986 1090 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 TCL6_3.1-201ENST00000619064 137 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 AC131971.1-201ENST00000332881 1482 ntBASIC8.72□□□□□ -1.01
SCAPERQ9BY12 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCAPERQ9BY12 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 Z80107.2-201ENST00000445127 392 ntBASIC8.71□□□□□ -1.01
SCAPERQ9BY12 RN7SL51P-201ENST00000468230 285 ntBASIC8.71□□□□□ -1.01
SCAPERQ9BY12 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 RPEP1-201ENST00000504507 658 ntBASIC8.71□□□□□ -1.01
SCAPERQ9BY12 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCAPERQ9BY12 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms