Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC114774.1-201ENST00000507410 1770 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 QRSL1P1-201ENST00000400977 1540 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 MIR1275-201ENST00000408770 80 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 RPL7AP14-201ENST00000424041 802 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AL139158.1-201ENST00000424719 340 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC099670.2-201ENST00000435130 321 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC005077.1-201ENST00000449226 375 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 RN7SL254P-201ENST00000460609 284 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC113367.2-201ENST00000505749 160 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 LDHAP1-201ENST00000509421 992 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC021146.10-201ENST00000515628 706 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 RN7SKP238-201ENST00000516483 249 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 OR4A42P-201ENST00000531397 938 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC006530.1-201ENST00000555980 571 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC005244.1-201ENST00000582566 339 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 HIRAP1-201ENST00000605318 787 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC022919.1-201ENST00000624979 626 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC104964.3-201ENST00000606115 2860 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AC109446.4-201ENST00000623235 2755 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 RNA5SP273-201ENST00000362484 113 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 RNA5SP326-201ENST00000363209 110 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 RNU1-136P-201ENST00000384181 164 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 RN7SKP17-201ENST00000411242 351 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 VN1R110P-201ENST00000438988 971 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC023141.8-201ENST00000442554 208 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 OR52I1-201ENST00000450052 1050 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC079080.1-201ENST00000479841 822 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC021006.1-201ENST00000489849 553 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC108103.1-201ENST00000511286 446 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC011853.1-201ENST00000518911 454 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC125612.1-201ENST00000547580 377 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC096996.1-201ENST00000563813 325 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AL163952.1-202ENST00000569625 600 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 RPL12P48-201ENST00000605620 304 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC091167.5-201ENST00000605689 894 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC092266.1-201ENST00000610958 165 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 FAM27E2-201ENST00000619668 403 ntBASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RSPO3Q9BXY4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RSPO3Q9BXY4 HSPD1P9-201ENST00000420325 1636 ntBASIC5.34□□□□□ -1.56
RSPO3Q9BXY4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.34□□□□□ -1.56
RSPO3Q9BXY4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RSPO3Q9BXY4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.34□□□□□ -1.56
RSPO3Q9BXY4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RSPO3Q9BXY4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RSPO3Q9BXY4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms