Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC112191.2-201ENST00000522428 333 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 PCNAP4-201ENST00000532690 730 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 TTC41P-205ENST00000551270 3963 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC123769.1-201ENST00000530992 3192 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AP002833.3-201ENST00000625075 2265 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC005224.3-201ENST00000584683 2140 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 OR10R3P-201ENST00000361688 942 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC127526.2-201ENST00000426436 775 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC104164.1-201ENST00000460282 590 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC110749.1-201ENST00000462007 357 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 CCDC11P1-201ENST00000503137 1162 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 NENFP3-201ENST00000503735 313 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 OR7E158P-201ENST00000524483 910 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 OR4A42P-201ENST00000531397 938 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 OR7E18P-201ENST00000592589 702 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 AC010329.1-201ENST00000593903 8328 ntBASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RPAP1Q9BWH6 WDR95P-201ENST00000425638 1542 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 THAP12P9-201ENST00000503971 2360 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 RN7SKP77-201ENST00000363261 353 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 RNA5SP211-201ENST00000365516 117 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AL391361.1-201ENST00000405580 489 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 RPL34P3-201ENST00000421454 338 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC073410.1-201ENST00000435125 589 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 TOMM22P4-201ENST00000511318 336 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 MIR4420-201ENST00000583944 77 ntBASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RPAP1Q9BWH6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.15□□□□□ -1.26
RPAP1Q9BWH6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
RPAP1Q9BWH6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.15□□□□□ -1.26
RPAP1Q9BWH6 NEPNP-201ENST00000404786 1371 ntBASIC7.15□□□□□ -1.26
RPAP1Q9BWH6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms