Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC140479.2-201ENST00000421567 3130 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 RN7SKP130-201ENST00000364924 301 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 MIR191-201ENST00000384873 92 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 PEX12P1-201ENST00000400284 1048 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AL079341.1-201ENST00000404701 1207 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 RN7SKP221-201ENST00000410420 301 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 FAM183DP-201ENST00000421987 399 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 SETP9-201ENST00000423837 832 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AKR1B10P1-201ENST00000425765 942 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC003989.1-201ENST00000434569 565 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 RPL12P49-201ENST00000441100 121 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 RRM2P4-201ENST00000441721 562 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 UBBP5-201ENST00000446970 266 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 KF459542.1-201ENST00000450908 553 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 Z83838.1-202ENST00000456225 839 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC104629.2-201ENST00000468627 598 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC135999.1-201ENST00000478962 479 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC015864.1-201ENST00000496512 544 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC021146.5-201ENST00000503544 545 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AL158068.1-201ENST00000506116 616 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC010442.1-201ENST00000515583 816 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 SNORA70.11-201ENST00000515987 138 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 SNORA70.13-201ENST00000516116 138 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC034205.1-201ENST00000520621 638 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC007068.2-201ENST00000543168 395 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC018690.1-201ENST00000608144 626 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 MIR6885-201ENST00000612241 66 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC097641.3-201ENST00000613523 464 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC068057.2-201ENST00000624047 895 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC005858.3-201ENST00000624756 589 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 SEPT7P7-201ENST00000420492 1301 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AP000473.2-201ENST00000602659 1537 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 AC092701.1-201ENST00000623627 1551 ntBASIC5.87□□□□□ -1.47
SNX18Q96RF0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX18Q96RF0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX18Q96RF0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX18Q96RF0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 RPL31P11-201ENST00000426558 1558 ntBASIC5.86□□□□□ -1.47
SNX18Q96RF0 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX18Q96RF0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms