Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 DOCK11P1-201ENST00000553480 5932 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 OR11H13P-201ENST00000359695 979 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 RNU5E-10P-201ENST00000363506 118 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 RNU1-65P-201ENST00000363919 148 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 TRAV35-201ENST00000390462 330 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 XKRYP1-201ENST00000423438 492 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 XKRYP2-201ENST00000432915 492 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 CLUHP1-201ENST00000435012 1190 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC013410.1-201ENST00000436223 1232 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 GTF2IP14-201ENST00000441415 586 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 CTSLP6-201ENST00000458273 1002 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC090543.1-201ENST00000492168 485 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC069306.1-201ENST00000507006 843 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC093664.1-201ENST00000511779 289 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 RNU5A-7P-201ENST00000515979 116 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 SCARNA21.2-201ENST00000516600 166 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 TOMM20P1-201ENST00000534518 427 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC134669.1-201ENST00000581275 672 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 MIMT1-201ENST00000597105 1050 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC234772.3-201ENST00000602277 528 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 RPP40P2-201ENST00000603596 712 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC064807.4-201ENST00000607201 407 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC004241.3-201ENST00000611728 517 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AC008759.3-201ENST00000613300 508 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AL355493.4-201ENST00000618530 292 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 SNX18P3-202ENST00000565670 1750 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 AL021877.2-201ENST00000624442 10684 ntBASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CHAMP1Q96JM3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 OR52B5P-204ENST00000641744 3467 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 RNA5SP478-201ENST00000364657 115 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC092648.1-201ENST00000425870 423 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 RPL34P27-201ENST00000428810 349 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC092106.2-201ENST00000436597 487 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 MTCYBP31-201ENST00000438855 1122 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 VN1R38P-201ENST00000450265 887 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 RPL32P14-201ENST00000463196 378 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 PCNAP1-201ENST00000505363 709 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC021106.1-201ENST00000509020 1058 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC105313.1-201ENST00000509121 353 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AP005902.2-201ENST00000518393 307 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 IGHV1-14-201ENST00000523391 241 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC005000.1-201ENST00000536192 288 ntBASIC7.32□□□□□ -1.24
CHAMP1Q96JM3 AC135279.1-201ENST00000543493 504 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms