Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC073109.1-201ENST00000445066 978 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC099521.1-201ENST00000482557 334 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 TRBV5-2-201ENST00000489095 273 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 MIR2117-201ENST00000516780 80 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 GTF2IP11-201ENST00000526931 420 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC007346.2-201ENST00000564816 892 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC006115.2-201ENST00000596823 202 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC069234.4-201ENST00000621276 412 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AC006600.2-201ENST00000624834 2506 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 WDR95P-201ENST00000425638 1542 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 AL449283.1-201ENST00000602631 3403 ntBASIC5.89□□□□□ -1.47
ECHDC3Q96DC8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 RNU1-59P-201ENST00000364829 162 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 RN7SKP292-201ENST00000365522 317 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC245060.4-201ENST00000413293 1121 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AK4P4-201ENST00000419465 646 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC126120.1-201ENST00000431082 470 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 DEFA9P-201ENST00000433042 285 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 PSMA2P2-201ENST00000504319 686 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC022826.1-201ENST00000519383 805 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 IGKV2-4-201ENST00000523070 340 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 OOSP1P2-201ENST00000579644 351 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 U1.25-201ENST00000614085 162 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AP005431.1-201ENST00000618479 319 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 U1.34-201ENST00000618578 162 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 U1.31-201ENST00000620022 160 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AP001962.1-201ENST00000624114 559 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC005225.5-201ENST00000623547 2225 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 OR13C1P-202ENST00000641378 2919 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 AC005261.2-201ENST00000593427 4258 ntBASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ECHDC3Q96DC8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
ECHDC3Q96DC8 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms