Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
HPS3Q969F9 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HPS3Q969F9 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.86□□□□□ -1.31
HPS3Q969F9 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.86□□□□□ -1.31
HPS3Q969F9 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HPS3Q969F9 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HPS3Q969F9 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.86□□□□□ -1.31
HPS3Q969F9 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 AC007114.2-201ENST00000576014 4281 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 AL662795.2-201ENST00000624252 3706 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
HPS3Q969F9 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 SNORA63.3-201ENST00000362682 132 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 RN7SKP187-201ENST00000365536 330 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 RNU6-925P-201ENST00000384629 104 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 PSMA6P1-201ENST00000400275 741 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 NPM1P38-201ENST00000403835 865 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 RN7SKP108-201ENST00000411367 328 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 AL359885.1-201ENST00000415786 903 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 AL606490.7-201ENST00000433136 191 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 HIGD1AP16-201ENST00000450986 258 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 RN7SL552P-201ENST00000462094 276 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 SNORA74.1-201ENST00000516320 180 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS3Q969F9 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS3Q969F9 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS3Q969F9 OOSP1P2-201ENST00000579644 351 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 AC006116.7-201ENST00000590141 756 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 DYNLL1P1-201ENST00000595442 269 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 AC027334.1-201ENST00000603257 310 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 QTRT1P1-201ENST00000604344 1078 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 AC012213.4-201ENST00000606457 354 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS3Q969F9 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 AL049777.1-201ENST00000622740 518 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 AC018659.2-201ENST00000624690 715 ntBASIC6.85□□□□□ -1.31
HPS3Q969F9 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HPS3Q969F9 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS3Q969F9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AC018628.1-201ENST00000624147 3819 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.84□□□□□ -1.31
HPS3Q969F9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HPS3Q969F9 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 RNA5SP375-201ENST00000362975 119 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 RNA5SP279-201ENST00000365513 117 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.84□□□□□ -1.31
HPS3Q969F9 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 MTND4LP17-201ENST00000414607 293 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 NME1P1-201ENST00000420914 382 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS3Q969F9 RPS26P4-201ENST00000431743 355 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 ELOCP3-201ENST00000439303 348 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.84□□□□□ -1.31
HPS3Q969F9 XKRY2-201ENST00000442362 1093 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.84□□□□□ -1.31
HPS3Q969F9 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.84□□□□□ -1.31
HPS3Q969F9 CTSLP6-201ENST00000458273 1002 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC108751.3-201ENST00000461814 1020 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 SLC25A51P1-201ENST00000468432 871 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 RPL23AP73-201ENST00000492507 471 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC008945.1-201ENST00000505144 499 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 AC119751.4-201ENST00000507498 357 ntBASIC6.84□□□□□ -1.31
HPS3Q969F9 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms