Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AP004289.1-201ENST00000436307 2205 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 RPS4XP5-201ENST00000419038 768 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC019205.1-201ENST00000421830 730 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC009784.1-201ENST00000426484 460 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 NDUFS5P5-201ENST00000437256 321 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AP006222.1-205ENST00000450734 457 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC011476.1-201ENST00000466725 307 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 OR56A7P-201ENST00000524865 941 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 EIF4A2P5-201ENST00000529914 499 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 GARSP1-201ENST00000570895 719 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 AC073342.2-201ENST00000595842 1800 ntBASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.02□□□□□ -1.45
SHROOM3Q8TF72 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 IMMTP1-201ENST00000435590 2219 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AP000547.3-204ENST00000588548 2523 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 RPS27P18-201ENST00000431701 247 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 SCARNA18.1-201ENST00000516330 83 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 RNA5SP34-201ENST00000516887 130 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AP003396.4-201ENST00000527574 265 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AL163952.1-202ENST00000569625 600 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AP005119.1-201ENST00000580956 292 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 RN7SL787P-201ENST00000613000 284 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AC018445.2-201ENST00000622987 260 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 CASC19-238ENST00000641523 1558 ntBASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM3Q8TF72 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 RNU1-150P-201ENST00000362491 162 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 RNA5SP211-201ENST00000365516 117 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC005042.1-201ENST00000393397 800 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC009237.12-201ENST00000604755 742 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC022919.1-201ENST00000624979 626 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms