Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PANDAR-201ENST00000629595 1506 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 FAM3C2-201ENST00000312214 681 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 ACA64.4-201ENST00000459070 127 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 RPS18P6-201ENST00000476880 458 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 FTH1P8-201ENST00000498161 514 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 RNU6-941P-201ENST00000516346 108 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 SCARNA9-201ENST00000530422 353 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC024589.2-201ENST00000605642 1294 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AL021368.3-201ENST00000607119 578 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AOX3P-204ENST00000491025 2107 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AL590139.1-201ENST00000416267 400 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC092647.3-201ENST00000443044 633 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 RN7SL447P-201ENST00000494711 245 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 NRBF2P4-201ENST00000520874 850 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC013731.1-201ENST00000604340 883 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC011369.2-201ENST00000624423 1567 ntBASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ALMS1Q8TCU4 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AC010132.2-201ENST00000295493 1043 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AL356967.1-201ENST00000406305 431 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AP002799.1-201ENST00000623552 423 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 MAPK10-350ENST00000641777 965 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AL133388.1-201ENST00000404509 287 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 RPS21P8-201ENST00000413365 247 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AL139128.1-201ENST00000413921 941 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AC093162.1-201ENST00000419682 124 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 RBM22P12-201ENST00000567098 1255 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 COL6A4P1-202ENST00000487147 4317 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AC022819.1-201ENST00000563495 3910 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AL390774.1-201ENST00000411924 246 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AC011447.4-201ENST00000587562 111 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 MIR6758-201ENST00000620653 63 ntBASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
ALMS1Q8TCU4 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms