Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 RACGAP1P-201ENST00000550663 1879 ntBASIC6.42□□□□□ -1.38
HIPK4Q8NE63 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 HSPD1P7-201ENST00000447985 1686 ntBASIC6.42□□□□□ -1.38
HIPK4Q8NE63 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 AL132640.2-201ENST00000559968 1698 ntBASIC6.42□□□□□ -1.38
HIPK4Q8NE63 Z98755.1-201ENST00000407015 1384 ntBASIC6.42□□□□□ -1.38
HIPK4Q8NE63 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 AC005332.9-201ENST00000620266 2921 ntBASIC6.42□□□□□ -1.38
HIPK4Q8NE63 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.42□□□□□ -1.38
HIPK4Q8NE63 PWRN1-212ENST00000569908 1435 ntBASIC6.42□□□□□ -1.38
HIPK4Q8NE63 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC130360.2-201ENST00000533477 1556 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 RNU6-1214P-201ENST00000363650 109 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 RNA5SP427-201ENST00000365323 119 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 RPS3AP5-201ENST00000389400 821 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC007068.1-201ENST00000396690 844 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 TYMSP1-201ENST00000407851 869 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 NENFP1-201ENST00000419476 466 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 CYP4F34P-201ENST00000425951 481 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC245452.2-201ENST00000435222 392 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AL353898.1-201ENST00000444055 238 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC069540.1-201ENST00000446320 988 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AL589880.1-201ENST00000448271 287 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 TRY2P-201ENST00000448860 689 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 CTSLP6-201ENST00000458273 1002 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC083806.1-201ENST00000468934 316 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC093719.1-201ENST00000480427 441 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC011037.1-201ENST00000483964 558 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC118282.2-201ENST00000508739 374 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 OR52K3P-201ENST00000531655 943 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 OR7E161P-201ENST00000533722 967 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 VDAC2P2-201ENST00000544463 901 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC015802.2-201ENST00000589690 189 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AL357140.4-201ENST00000636827 412 ntBASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HIPK4Q8NE63 ZNF101P1-201ENST00000435701 1720 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms