Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AC087516.1-201ENST00000561236 2428 ntBASIC8.91□□□□□ -0.98
VPS8Q8N3P4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
VPS8Q8N3P4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 TNPO1P1-201ENST00000423641 1138 ntBASIC8.9□□□□□ -0.98
VPS8Q8N3P4 LDHAP2-201ENST00000437325 985 ntBASIC8.9□□□□□ -0.98
VPS8Q8N3P4 AC019185.1-201ENST00000442718 389 ntBASIC8.9□□□□□ -0.98
VPS8Q8N3P4 AP000547.1-201ENST00000454360 617 ntBASIC8.9□□□□□ -0.98
VPS8Q8N3P4 AC011225.1-201ENST00000457751 369 ntBASIC8.9□□□□□ -0.98
VPS8Q8N3P4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 DHFRP1-201ENST00000579682 559 ntBASIC8.9□□□□□ -0.98
VPS8Q8N3P4 AL133481.2-203ENST00000607558 139 ntBASIC8.9□□□□□ -0.98
VPS8Q8N3P4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 AC092070.2-203ENST00000598377 3644 ntBASIC8.9□□□□□ -0.98
VPS8Q8N3P4 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
VPS8Q8N3P4 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
VPS8Q8N3P4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
VPS8Q8N3P4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.9□□□□□ -0.99
VPS8Q8N3P4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.9□□□□□ -0.99
VPS8Q8N3P4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
VPS8Q8N3P4 PWAR1-201ENST00000624188 2414 ntBASIC8.9□□□□□ -0.99
VPS8Q8N3P4 ZNF969P-201ENST00000510345 2341 ntBASIC8.9□□□□□ -0.99
VPS8Q8N3P4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VPS8Q8N3P4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 CCDC162P-202ENST00000368966 6751 ntBASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AC005042.1-201ENST00000393397 800 ntBASIC8.89□□□□□ -0.99
VPS8Q8N3P4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AC012075.1-201ENST00000436549 580 ntBASIC8.89□□□□□ -0.99
VPS8Q8N3P4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AL136038.1-201ENST00000497246 351 ntBASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AL049872.1-201ENST00000556323 322 ntBASIC8.89□□□□□ -0.99
VPS8Q8N3P4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 MIR3176-201ENST00000582210 90 ntBASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AC022467.1-201ENST00000614738 749 ntBASIC8.89□□□□□ -0.99
VPS8Q8N3P4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AP004289.1-201ENST00000436307 2205 ntBASIC8.89□□□□□ -0.99
VPS8Q8N3P4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS8Q8N3P4 GAPDHP42-201ENST00000406848 981 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 RNU4-64P-201ENST00000410795 131 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AL513325.1-201ENST00000417716 1034 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 COPS8P2-201ENST00000473228 627 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AC021146.10-201ENST00000515628 706 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 IMMP1LP3-201ENST00000604197 224 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AL589674.2-201ENST00000604304 337 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AP000894.4-201ENST00000610185 483 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AL049767.1-202ENST00000637826 242 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 AL662795.2-201ENST00000624252 3706 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
VPS8Q8N3P4 RMRPP5-201ENST00000411156 267 ntBASIC8.88□□□□□ -0.99
VPS8Q8N3P4 MTND4LP17-201ENST00000414607 293 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms