Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC079064.1-201ENST00000528365 362 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MTCO2P15-201ENST00000532655 656 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 RN7SL199P-201ENST00000578752 281 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 RN7SL656P-201ENST00000579044 281 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 RN7SL404P-201ENST00000582421 281 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC069366.1-201ENST00000583159 838 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MIR6885-201ENST00000612241 66 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AL392048.1-201ENST00000613946 534 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC020978.6-201ENST00000571197 3177 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL008987.1-201ENST00000415528 237 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 RPS3AP37-201ENST00000419176 745 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL513175.2-201ENST00000422071 443 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 MTND1P20-201ENST00000430341 950 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC084290.1-201ENST00000434995 374 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL031681.1-201ENST00000443304 400 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL445991.1-201ENST00000450381 475 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 OR7E22P-201ENST00000478335 1035 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 RN7SKP196-201ENST00000516267 345 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 RNU6-1028P-201ENST00000517164 93 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 GCSHP4-201ENST00000538792 439 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 CTSLP2-201ENST00000580501 394 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 CBX3P2-202ENST00000583365 535 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC211486.4-201ENST00000621495 113 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AP003497.2-201ENST00000624220 967 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AL049536.1-201ENST00000625043 744 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 LINC02211-204ENST00000642024 1070 ntBASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM48Q8IWZ4 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC005034.3-201ENST00000604845 1747 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms