Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AP000662.1-201ENST00000530952 487 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC010547.6-201ENST00000571789 193 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC020916.2-201ENST00000591242 360 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC091948.2-201ENST00000636510 279 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC024651.2-201ENST00000562480 2098 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AP000641.1-201ENST00000531988 1639 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC009120.2-204ENST00000621548 2032 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 CR382285.2-201ENST00000624662 1495 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC005618.1-201ENST00000606901 3148 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 RNA5SP350-201ENST00000363298 111 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AL023284.3-201ENST00000407767 334 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC093155.2-201ENST00000420734 937 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AL355433.1-201ENST00000422804 300 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 MTND2P31-201ENST00000512602 616 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 CYCSP22-201ENST00000517555 339 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AP002981.1-201ENST00000517692 975 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 MIR4776-2-201ENST00000580204 80 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AL132640.3-201ENST00000630473 177 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC010624.4-201ENST00000597606 1351 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AC011416.1-201ENST00000514947 1732 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 AL033543.1-201ENST00000623440 13454 ntBASIC6.67□□□□□ -1.34
HERC6Q8IVU3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.67□□□□□ -1.34
HERC6Q8IVU3 ICE2P1-201ENST00000512800 1849 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 MIR375-201ENST00000362103 64 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 RNA5SP333-201ENST00000363466 118 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 RNA5SP334-201ENST00000364825 118 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AC098592.2-201ENST00000413158 265 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 SUMO2P1-206ENST00000445436 284 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 VN1R38P-201ENST00000450265 887 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 SUMO2P15-201ENST00000604285 278 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 AL645933.2-201ENST00000606743 1207 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
HERC6Q8IVU3 MIR193BHG-214ENST00000641765 509 ntBASIC6.66□□□□□ -1.34
HERC6Q8IVU3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms