Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RNU4ATAC-201ENST00000580972 127 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AC073333.2-201ENST00000603589 769 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 SNORA74.4-201ENST00000607595 199 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 FAM27E2-201ENST00000619668 403 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 MAPK10-350ENST00000641777 965 ntBASIC5.64□□□□□ -1.51
CCDC71Q8IV32 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71Q8IV32 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AL161756.3-201ENST00000641216 2071 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC006600.2-201ENST00000624834 2506 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 NPM1P37-201ENST00000403105 874 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 NPM1P38-201ENST00000403835 865 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 RN7SKP144-201ENST00000411108 279 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 MRPS21P2-201ENST00000424704 264 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC097463.1-201ENST00000447288 481 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 PPIAP27-201ENST00000453800 265 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 OSTCP1-201ENST00000455507 450 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 RN7SL714P-201ENST00000487050 298 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 LSM3P4-201ENST00000502948 309 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 OR4D12P-201ENST00000509361 911 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC011411.1-201ENST00000509592 876 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 RN7SKP238-201ENST00000516483 249 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 MIR4701-201ENST00000583094 63 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC005332.4-201ENST00000592752 579 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC004801.6-201ENST00000616571 978 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 RFPL4AP6-201ENST00000616792 846 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 MIR7159-201ENST00000620587 66 ntBASIC5.63□□□□□ -1.51
CCDC71Q8IV32 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71Q8IV32 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AL136984.1-201ENST00000607611 1893 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 CASC19-260ENST00000641828 2001 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AC027279.4-201ENST00000624371 2072 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 RNA5SP110-201ENST00000362638 115 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 RN7SKP17-201ENST00000411242 351 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AC023141.3-201ENST00000436698 278 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 RANP2-201ENST00000456833 229 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 TRBV5-2-201ENST00000489095 273 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AC025458.1-201ENST00000506046 166 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AL158068.1-201ENST00000506116 616 ntBASIC5.62□□□□□ -1.51
CCDC71Q8IV32 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC71Q8IV32 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms