Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC010886.1-201ENST00000437380 2869 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 RNU6-543P-201ENST00000362576 108 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 snoZ40.1-201ENST00000364540 72 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 FABP12P1-201ENST00000401911 322 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 RN7SKP166-201ENST00000410812 305 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 Y_RNA.619-201ENST00000410951 90 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 LINC01881-201ENST00000416103 412 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 EEF1B2P5-201ENST00000444820 548 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL929288.2-201ENST00000446368 407 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC005002.1-201ENST00000447458 540 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 OR51P1P-201ENST00000447547 942 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 RPL31P44-201ENST00000447680 377 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL121578.2-201ENST00000448797 447 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC096922.1-201ENST00000461635 651 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 RPL7P40-201ENST00000481703 745 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 LINC00888-204ENST00000487386 421 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC008083.2-201ENST00000546707 476 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC044913.1-201ENST00000557200 430 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 MIR548Y-201ENST00000582739 110 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 EIF1P6-201ENST00000600054 334 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL392112.1-201ENST00000605115 829 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AP005212.3-201ENST00000619964 528 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC130456.6-201ENST00000623745 765 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AL162377.2-201ENST00000624532 337 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC068213.1-201ENST00000625124 226 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 MFSD8-245ENST00000641743 948 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC110998.1-201ENST00000519029 2053 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 PPBPP2-201ENST00000513150 1362 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 AC025263.3-201ENST00000622965 1396 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 HSPD1P9-201ENST00000420325 1636 ntBASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS4Q8IUM7 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AL359091.1-201ENST00000449048 1734 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 FDPSP5-201ENST00000399474 1057 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC027644.1-201ENST00000419595 298 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 MTCO1P3-201ENST00000429327 192 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 MTND1P32-201ENST00000433043 938 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 UBE2D3P4-201ENST00000441973 436 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 ARL5AP2-201ENST00000444698 533 ntBASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.55□□□□□ -1.2
NPAS4Q8IUM7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms