Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MED28P3-201ENST00000444288 531 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 RPL12P30-201ENST00000488389 499 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 OR7E157P-201ENST00000494376 911 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 CCDC11P1-201ENST00000503137 1162 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 OR7E99P-201ENST00000505750 922 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 MAST4-IT1-201ENST00000514241 658 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 NATP-201ENST00000523491 878 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC019322.1-201ENST00000571869 389 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC027216.1-201ENST00000577726 685 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC124916.2-201ENST00000604416 224 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 AC010998.3-201ENST00000613871 631 ntBASIC5.27□□□□□ -1.57
LRRC28Q86X40 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
LRRC28Q86X40 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LRRC28Q86X40 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC015689.2-201ENST00000528172 1738 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 OR56A4-201ENST00000330728 1209 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 RN7SKP185-201ENST00000362813 326 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 RN7SKP81-201ENST00000365603 331 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 GCNT1P4-201ENST00000404096 329 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 SNORA11.5-201ENST00000408163 128 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 RN7SKP144-201ENST00000411108 279 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 MYL6P5-201ENST00000412707 459 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 RPSAP65-201ENST00000429660 595 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 CYCSP51-201ENST00000443545 318 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 FRG2FP-204ENST00000453982 852 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 AL133351.3-201ENST00000454998 193 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 NPM1P28-201ENST00000492269 840 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 RPL37P23-201ENST00000492641 294 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 RN7SKP288-201ENST00000516227 268 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC006512.2-201ENST00000543250 486 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC092865.1-201ENST00000544395 1023 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC126615.2-201ENST00000553003 515 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC007346.2-201ENST00000564816 892 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.26□□□□□ -1.57
LRRC28Q86X40 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LRRC28Q86X40 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.26□□□□□ -1.57
LRRC28Q86X40 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC28Q86X40 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC28Q86X40 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC28Q86X40 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC28Q86X40 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.25□□□□□ -1.57
LRRC28Q86X40 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC28Q86X40 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LRRC28Q86X40 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.25□□□□□ -1.57
LRRC28Q86X40 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LRRC28Q86X40 RNA5SP346-201ENST00000363541 121 ntBASIC5.25□□□□□ -1.57
LRRC28Q86X40 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.25□□□□□ -1.57
LRRC28Q86X40 AC087752.1-201ENST00000391360 558 ntBASIC5.25□□□□□ -1.57
LRRC28Q86X40 RN7SKP121-201ENST00000410842 305 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms