Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 RNU12-2P-201ENST00000364789 156 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 MIR421-201ENST00000365696 85 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 RNU2-16P-201ENST00000410712 136 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 NUP35P2-201ENST00000416748 943 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC246680.2-201ENST00000422106 389 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC021876.1-201ENST00000425959 359 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC244035.1-201ENST00000430042 390 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC091390.2-201ENST00000432573 374 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AL392003.1-201ENST00000434394 243 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 RPEP4-201ENST00000437636 602 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 EEF1A1P39-201ENST00000440791 250 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 SNRPEP8-201ENST00000442866 260 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 SRP68P2-201ENST00000456184 254 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 NMNAT1P3-201ENST00000457517 888 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 BX323845.2-201ENST00000458382 234 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 GAPDHP53-201ENST00000458397 924 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AP001803.1-201ENST00000525668 147 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 GLYATL1P4-201ENST00000529326 906 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 MIR4800-201ENST00000537353 80 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 BLZF2P-201ENST00000553776 1130 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 MIR4310-201ENST00000582950 57 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 FAM60CP-201ENST00000591086 664 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 VN1R83P-201ENST00000595685 445 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC073544.2-201ENST00000601155 540 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 MTND3P19-201ENST00000603825 345 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 CYCSP1-201ENST00000604815 315 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC087894.3-201ENST00000623682 349 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 AL356585.10-201ENST00000641883 123 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF43Q68DV7 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
RNF43Q68DV7 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RNF43Q68DV7 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
RNF43Q68DV7 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF43Q68DV7 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF43Q68DV7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF43Q68DV7 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.4□□□□□ -1.23
RNF43Q68DV7 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.4□□□□□ -1.23
RNF43Q68DV7 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.4□□□□□ -1.23
RNF43Q68DV7 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC073342.2-201ENST00000595842 1800 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 HSPD1P1-201ENST00000503199 1726 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 RNU6-553P-201ENST00000364047 96 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 RNU6-83P-201ENST00000384568 112 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 MIR199B-201ENST00000384849 110 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 RN7SKP146-201ENST00000410242 334 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 RN7SKP273-201ENST00000411392 314 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 GEMIN2P2-201ENST00000418195 715 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 ELOCP9-201ENST00000418624 239 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 EIF1P1-201ENST00000421436 341 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AL672212.1-201ENST00000422246 400 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms