Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC020898.1-201ENST00000474167 787 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 RN7SL604P-201ENST00000492589 296 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC090638.1-201ENST00000498296 909 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC183089.2-201ENST00000637931 916 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AL359195.2-201ENST00000623657 4412 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AL050335.1-201ENST00000396909 869 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 RPL17P36-201ENST00000420302 549 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 C4BPAP2-201ENST00000428434 478 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC245047.5-201ENST00000437312 556 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC096741.1-201ENST00000472250 846 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC103987.1-201ENST00000473394 348 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 RN7SL570P-201ENST00000484405 292 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 HMGB1P23-201ENST00000518743 568 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 MAPK10-287ENST00000641217 3037 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 ZNF733P-202ENST00000444809 1573 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL133173.1-201ENST00000423458 397 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 CYP4F32P-201ENST00000426492 504 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 RANP2-201ENST00000456833 229 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AC109462.1-201ENST00000491087 368 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 OR5AN2P-201ENST00000534535 896 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL118522.2-201ENST00000616045 615 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AC130456.6-201ENST00000623745 765 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 OR11H2-202ENST00000641517 1085 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AC016583.1-201ENST00000624221 2431 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL133388.1-201ENST00000404509 287 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 RPS4XP9-201ENST00000405151 780 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL133482.1-201ENST00000415988 498 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL138878.2-201ENST00000440581 1241 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 TAS2R6P-201ENST00000605022 826 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC5.68□□□□□ -1.5
RIF1Q5UIP0 MFSD8-219ENST00000641228 2559 ntBASIC5.68□□□□□ -1.5
RIF1Q5UIP0 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIF1Q5UIP0 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms