Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC113191.1-201ENST00000517759 403 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX4Q33E94 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX4Q33E94 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 RN7SL66P-201ENST00000582099 264 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX4Q33E94 uc_338.26-201ENST00000612659 160 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 MIR6774-201ENST00000614651 70 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 AC241377.1-201ENST00000619797 406 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 AL122023.1-201ENST00000622847 530 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX4Q33E94 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX4Q33E94 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX4Q33E94 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX4Q33E94 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
RFX4Q33E94 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX4Q33E94 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFX4Q33E94 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX4Q33E94 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX4Q33E94 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX4Q33E94 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RFX4Q33E94 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX4Q33E94 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX4Q33E94 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RFX4Q33E94 NACAP7-201ENST00000407371 609 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AL139805.1-201ENST00000407837 289 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AL096829.1-201ENST00000413677 457 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 NMD3P2-201ENST00000421815 761 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AC099677.3-201ENST00000427081 395 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.44□□□□□ -1.54
RFX4Q33E94 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
RFX4Q33E94 AL645936.1-201ENST00000441979 518 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 CYCSP51-201ENST00000443545 318 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 RNU1-88P-201ENST00000459274 128 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 SNORD125-201ENST00000459538 96 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AC104164.1-201ENST00000460282 590 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AC006539.1-201ENST00000481419 501 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 RPL38P3-201ENST00000484463 213 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AC117500.1-201ENST00000497352 755 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RFX4Q33E94 LDHBP3-201ENST00000514909 822 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 SNORA74.1-201ENST00000516320 180 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.44□□□□□ -1.54
RFX4Q33E94 OR7E158P-201ENST00000524483 910 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AC021269.1-201ENST00000526860 705 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.44□□□□□ -1.54
RFX4Q33E94 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.44□□□□□ -1.54
RFX4Q33E94 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.44□□□□□ -1.54
RFX4Q33E94 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.44□□□□□ -1.54
RFX4Q33E94 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX4Q33E94 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX4Q33E94 AL162574.1-201ENST00000615702 950 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 AC096861.1-201ENST00000616652 240 ntBASIC5.44□□□□□ -1.54
RFX4Q33E94 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX4Q33E94 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX4Q33E94 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX4Q33E94 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RFX4Q33E94 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RFX4Q33E94 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 MAPK10-338ENST00000641647 3362 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RFX4Q33E94 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX4Q33E94 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFX4Q33E94 SNORA70.6-201ENST00000383934 134 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RFX4Q33E94 RNA5SP91-201ENST00000390902 119 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 PRELID1P1-201ENST00000403549 660 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 RNA5SP156-201ENST00000410250 110 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 AC108479.1-201ENST00000431142 427 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.43□□□□□ -1.54
RFX4Q33E94 AL663074.2-201ENST00000440621 479 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 AC092601.1-201ENST00000444526 383 ntBASIC5.43□□□□□ -1.54
RFX4Q33E94 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms