Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
UBA52P62987 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
UBA52P62987 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
UBA52P62987 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.18□□□□□ -1.58
UBA52P62987 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UBA52P62987 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 AL137141.1-201ENST00000624622 4836 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.17□□□□□ -1.58
UBA52P62987 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 HSPD1P9-201ENST00000420325 1636 ntBASIC5.17□□□□□ -1.58
UBA52P62987 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
UBA52P62987 AC023490.2-201ENST00000359859 470 ntBASIC5.17□□□□□ -1.58
UBA52P62987 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
UBA52P62987 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 RPS3P2-201ENST00000421346 701 ntBASIC5.17□□□□□ -1.58
UBA52P62987 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
UBA52P62987 AC138761.5-201ENST00000433967 325 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
UBA52P62987 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.17□□□□□ -1.58
UBA52P62987 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.17□□□□□ -1.58
UBA52P62987 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 AC022415.1-202ENST00000486612 523 ntBASIC5.17□□□□□ -1.58
UBA52P62987 RPL12P30-201ENST00000488389 499 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 LSM3P4-201ENST00000502948 309 ntBASIC5.17□□□□□ -1.58
UBA52P62987 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.17□□□□□ -1.58
UBA52P62987 AC138832.1-201ENST00000522871 556 ntBASIC5.17□□□□□ -1.58
UBA52P62987 TRIM77BP-201ENST00000524985 1119 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AC027369.2-201ENST00000528030 440 ntBASIC5.17□□□□□ -1.58
UBA52P62987 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.17□□□□□ -1.58
UBA52P62987 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 AL049779.3-201ENST00000557141 606 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.17□□□□□ -1.58
UBA52P62987 AC009120.3-201ENST00000563335 499 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.17□□□□□ -1.58
UBA52P62987 AC008507.3-201ENST00000585753 472 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.17□□□□□ -1.58
UBA52P62987 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.17□□□□□ -1.58
UBA52P62987 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.17□□□□□ -1.58
UBA52P62987 OR51C1P-201ENST00000608504 942 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AC073389.3-201ENST00000609434 935 ntBASIC5.17□□□□□ -1.58
UBA52P62987 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
UBA52P62987 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
UBA52P62987 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
UBA52P62987 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 AC023245.2-201ENST00000530760 2978 ntBASIC5.17□□□□□ -1.58
UBA52P62987 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
UBA52P62987 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 RPS2P45-201ENST00000469997 2057 ntBASIC5.17□□□□□ -1.58
UBA52P62987 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.17□□□□□ -1.58
UBA52P62987 AC011416.1-201ENST00000514947 1732 ntBASIC5.17□□□□□ -1.58
UBA52P62987 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UBA52P62987 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
UBA52P62987 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.16□□□□□ -1.58
UBA52P62987 AL031123.3-201ENST00000623345 1837 ntBASIC5.16□□□□□ -1.58
UBA52P62987 AL031595.2-201ENST00000624215 19071 ntBASIC5.16□□□□□ -1.58
UBA52P62987 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.16□□□□□ -1.58
UBA52P62987 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.16□□□□□ -1.58
UBA52P62987 AC094019.1-201ENST00000434678 472 ntBASIC5.16□□□□□ -1.58
UBA52P62987 AL391987.1-201ENST00000441025 200 ntBASIC5.16□□□□□ -1.58
UBA52P62987 MED28P3-201ENST00000444288 531 ntBASIC5.16□□□□□ -1.58
UBA52P62987 RBMY2AP-201ENST00000445405 1157 ntBASIC5.16□□□□□ -1.58
UBA52P62987 AC097463.1-201ENST00000447288 481 ntBASIC5.16□□□□□ -1.58
UBA52P62987 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UBA52P62987 RBMY2CP-201ENST00000448575 1157 ntBASIC5.16□□□□□ -1.58
UBA52P62987 RBMY2DP-202ENST00000448881 1157 ntBASIC5.16□□□□□ -1.58
UBA52P62987 RBMY2BP-202ENST00000451071 1156 ntBASIC5.16□□□□□ -1.58
UBA52P62987 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.16□□□□□ -1.58
UBA52P62987 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms