Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VBP1P61758 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VBP1P61758 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.58
VBP1P61758 FBXL21-201ENST00000297158 1305 ntBASIC5.21□□□□□ -1.58
VBP1P61758 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.21□□□□□ -1.58
VBP1P61758 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.21□□□□□ -1.58
VBP1P61758 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.2□□□□□ -1.58
VBP1P61758 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VBP1P61758 RBMY1HP-201ENST00000382759 1389 ntBASIC5.2□□□□□ -1.58
VBP1P61758 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VBP1P61758 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VBP1P61758 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.2□□□□□ -1.58
VBP1P61758 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VBP1P61758 RNA5SP211-201ENST00000365516 117 ntBASIC5.2□□□□□ -1.58
VBP1P61758 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.2□□□□□ -1.58
VBP1P61758 MIR137-201ENST00000385223 102 ntBASIC5.2□□□□□ -1.58
VBP1P61758 U3.28-201ENST00000391249 210 ntBASIC5.2□□□□□ -1.58
VBP1P61758 RPSAP44-201ENST00000406712 884 ntBASIC5.2□□□□□ -1.58
VBP1P61758 SSR1P1-201ENST00000407630 814 ntBASIC5.2□□□□□ -1.58
VBP1P61758 RN7SKP221-201ENST00000410420 301 ntBASIC5.2□□□□□ -1.58
VBP1P61758 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.2□□□□□ -1.58
VBP1P61758 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 AC013410.1-201ENST00000436223 1232 ntBASIC5.2□□□□□ -1.58
VBP1P61758 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.2□□□□□ -1.58
VBP1P61758 AC004129.2-201ENST00000457229 287 ntBASIC5.2□□□□□ -1.58
VBP1P61758 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VBP1P61758 OR4D12P-201ENST00000509361 911 ntBASIC5.2□□□□□ -1.58
VBP1P61758 AC137549.1-201ENST00000514243 533 ntBASIC5.2□□□□□ -1.58
VBP1P61758 AC021733.2-201ENST00000518830 497 ntBASIC5.2□□□□□ -1.58
VBP1P61758 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.2□□□□□ -1.58
VBP1P61758 LSM3P2-201ENST00000551246 273 ntBASIC5.2□□□□□ -1.58
VBP1P61758 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.2□□□□□ -1.58
VBP1P61758 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VBP1P61758 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.2□□□□□ -1.58
VBP1P61758 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VBP1P61758 OR4C49P-201ENST00000563891 900 ntBASIC5.2□□□□□ -1.58
VBP1P61758 MIR5705-201ENST00000579870 89 ntBASIC5.2□□□□□ -1.58
VBP1P61758 MIR4312-201ENST00000579909 76 ntBASIC5.2□□□□□ -1.58
VBP1P61758 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.2□□□□□ -1.58
VBP1P61758 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.2□□□□□ -1.58
VBP1P61758 RPL29P33-201ENST00000587474 316 ntBASIC5.2□□□□□ -1.58
VBP1P61758 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.2□□□□□ -1.58
VBP1P61758 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.2□□□□□ -1.58
VBP1P61758 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VBP1P61758 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VBP1P61758 AC073488.6-201ENST00000632293 754 ntBASIC5.2□□□□□ -1.58
VBP1P61758 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
VBP1P61758 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.2□□□□□ -1.58
VBP1P61758 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.2□□□□□ -1.58
VBP1P61758 AC100810.3-201ENST00000633189 2240 ntBASIC5.2□□□□□ -1.58
VBP1P61758 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.2□□□□□ -1.58
VBP1P61758 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VBP1P61758 TUBBP10-201ENST00000427668 1301 ntBASIC5.2□□□□□ -1.58
VBP1P61758 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VBP1P61758 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VBP1P61758 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
VBP1P61758 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.19□□□□□ -1.58
VBP1P61758 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.19□□□□□ -1.58
VBP1P61758 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.19□□□□□ -1.58
VBP1P61758 CASC19-221ENST00000641309 1382 ntBASIC5.19□□□□□ -1.58
VBP1P61758 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 Z95331.1-201ENST00000623075 23112 ntBASIC5.19□□□□□ -1.58
VBP1P61758 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 RN7SKP77-201ENST00000363261 353 ntBASIC5.19□□□□□ -1.58
VBP1P61758 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VBP1P61758 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.19□□□□□ -1.58
VBP1P61758 RPS14P4-201ENST00000415880 418 ntBASIC5.19□□□□□ -1.58
VBP1P61758 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.19□□□□□ -1.58
VBP1P61758 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC5.19□□□□□ -1.58
VBP1P61758 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.19□□□□□ -1.58
VBP1P61758 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.19□□□□□ -1.58
VBP1P61758 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.19□□□□□ -1.58
VBP1P61758 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.19□□□□□ -1.58
VBP1P61758 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 SOCS5P1-201ENST00000440415 949 ntBASIC5.19□□□□□ -1.58
VBP1P61758 AC092421.1-201ENST00000448148 418 ntBASIC5.19□□□□□ -1.58
VBP1P61758 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.19□□□□□ -1.58
VBP1P61758 AC025271.1-201ENST00000485045 429 ntBASIC5.19□□□□□ -1.58
VBP1P61758 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.19□□□□□ -1.58
VBP1P61758 GAPDHP71-201ENST00000511530 1003 ntBASIC5.19□□□□□ -1.58
VBP1P61758 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.19□□□□□ -1.58
VBP1P61758 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.19□□□□□ -1.58
VBP1P61758 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.19□□□□□ -1.58
VBP1P61758 OR4A17P-201ENST00000526032 904 ntBASIC5.19□□□□□ -1.58
VBP1P61758 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.19□□□□□ -1.58
VBP1P61758 AC011193.2-201ENST00000582638 367 ntBASIC5.19□□□□□ -1.58
VBP1P61758 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms