Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.11□□□□□ -1.59
ACTBP60709 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.11□□□□□ -1.59
ACTBP60709 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 RNA5SP418-201ENST00000515951 117 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC078899.1-201ENST00000521432 1185 ntBASIC5.11□□□□□ -1.59
ACTBP60709 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTBP60709 AC090424.1-201ENST00000535243 736 ntBASIC5.11□□□□□ -1.59
ACTBP60709 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.11□□□□□ -1.59
ACTBP60709 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.11□□□□□ -1.59
ACTBP60709 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 TDGP1-201ENST00000543961 1229 ntBASIC5.11□□□□□ -1.59
ACTBP60709 RPL41P2-201ENST00000544920 409 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.11□□□□□ -1.59
ACTBP60709 AC027216.1-201ENST00000577726 685 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC119403.2-201ENST00000590960 598 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AL513327.3-201ENST00000602618 469 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC006363.1-201ENST00000603806 463 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.11□□□□□ -1.59
ACTBP60709 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.11□□□□□ -1.59
ACTBP60709 AC132825.8-201ENST00000640783 297 ntBASIC5.11□□□□□ -1.59
ACTBP60709 SAMMSON-213ENST00000641336 1521 ntBASIC5.11□□□□□ -1.59
ACTBP60709 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTBP60709 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ACTBP60709 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ACTBP60709 HSPA8P14-201ENST00000552265 1805 ntBASIC5.11□□□□□ -1.59
ACTBP60709 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 RPS2P45-201ENST00000469997 2057 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC012254.3-201ENST00000591183 2117 ntBASIC5.11□□□□□ -1.59
ACTBP60709 AC004158.1-201ENST00000564508 4319 ntBASIC5.11□□□□□ -1.59
ACTBP60709 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
ACTBP60709 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ACTBP60709 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ACTBP60709 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.1□□□□□ -1.59
ACTBP60709 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
ACTBP60709 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ACTBP60709 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ACTBP60709 RN7SKP185-201ENST00000362813 326 ntBASIC5.1□□□□□ -1.59
ACTBP60709 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ACTBP60709 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.1□□□□□ -1.59
ACTBP60709 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 AL360013.1-201ENST00000419031 858 ntBASIC5.1□□□□□ -1.59
ACTBP60709 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.1□□□□□ -1.59
ACTBP60709 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 AC245291.3-201ENST00000443400 292 ntBASIC5.1□□□□□ -1.59
ACTBP60709 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 HSPD1P7-201ENST00000447985 1686 ntBASIC5.1□□□□□ -1.59
ACTBP60709 RPL12P39-201ENST00000455456 496 ntBASIC5.1□□□□□ -1.59
ACTBP60709 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 RN7SL39P-201ENST00000462264 297 ntBASIC5.1□□□□□ -1.59
ACTBP60709 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.1□□□□□ -1.59
ACTBP60709 MRPS5P3-201ENST00000515577 166 ntBASIC5.1□□□□□ -1.59
ACTBP60709 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.1□□□□□ -1.59
ACTBP60709 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.1□□□□□ -1.59
ACTBP60709 AC135983.3-201ENST00000528049 1226 ntBASIC5.1□□□□□ -1.59
ACTBP60709 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 AC126615.2-201ENST00000553003 515 ntBASIC5.1□□□□□ -1.59
ACTBP60709 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 BMS1P16-201ENST00000556075 1147 ntBASIC5.1□□□□□ -1.59
ACTBP60709 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.1□□□□□ -1.59
ACTBP60709 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.1□□□□□ -1.59
ACTBP60709 AC063977.7-201ENST00000594454 337 ntBASIC5.1□□□□□ -1.59
ACTBP60709 AL451049.1-201ENST00000608672 497 ntBASIC5.1□□□□□ -1.59
ACTBP60709 GAPDHP41-201ENST00000613707 975 ntBASIC5.1□□□□□ -1.59
ACTBP60709 AC007786.3-201ENST00000615154 596 ntBASIC5.1□□□□□ -1.59
ACTBP60709 OR8G7P-201ENST00000616658 848 ntBASIC5.1□□□□□ -1.59
ACTBP60709 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 AC007603.3-201ENST00000636915 979 ntBASIC5.1□□□□□ -1.59
ACTBP60709 OR9K1P-202ENST00000641111 3217 ntBASIC5.1□□□□□ -1.59
ACTBP60709 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ACTBP60709 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ACTBP60709 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.1□□□□□ -1.59
ACTBP60709 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
ACTBP60709 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
ACTBP60709 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ACTBP60709 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
ACTBP60709 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms