Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.41□□□□□ -1.7
CMC4P56277 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.41□□□□□ -1.7
CMC4P56277 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.41□□□□□ -1.7
CMC4P56277 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.41□□□□□ -1.7
CMC4P56277 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.41□□□□□ -1.7
CMC4P56277 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.41□□□□□ -1.7
CMC4P56277 AP001496.3-201ENST00000580230 913 ntBASIC4.41□□□□□ -1.7
CMC4P56277 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.41□□□□□ -1.7
CMC4P56277 AC107993.1-201ENST00000591343 684 ntBASIC4.41□□□□□ -1.7
CMC4P56277 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.41□□□□□ -1.7
CMC4P56277 AL096712.1-201ENST00000614561 159 ntBASIC4.41□□□□□ -1.7
CMC4P56277 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 AL355974.3-201ENST00000617383 467 ntBASIC4.41□□□□□ -1.7
CMC4P56277 MIR6778-201ENST00000617912 73 ntBASIC4.41□□□□□ -1.7
CMC4P56277 AL136228.1-201ENST00000622221 319 ntBASIC4.41□□□□□ -1.7
CMC4P56277 AC022400.9-201ENST00000623633 273 ntBASIC4.41□□□□□ -1.7
CMC4P56277 AC018659.2-201ENST00000624690 715 ntBASIC4.41□□□□□ -1.7
CMC4P56277 MAPK10-350ENST00000641777 965 ntBASIC4.41□□□□□ -1.7
CMC4P56277 PARP4P2-201ENST00000446672 3326 ntBASIC4.41□□□□□ -1.7
CMC4P56277 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC4.41□□□□□ -1.7
CMC4P56277 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC4.41□□□□□ -1.7
CMC4P56277 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC4.41□□□□□ -1.7
CMC4P56277 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.41□□□□□ -1.7
CMC4P56277 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CMC4P56277 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CMC4P56277 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CMC4P56277 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.41□□□□□ -1.7
CMC4P56277 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CMC4P56277 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CMC4P56277 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CMC4P56277 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CMC4P56277 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CMC4P56277 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CMC4P56277 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CMC4P56277 SNORA11.5-201ENST00000408163 128 ntBASIC4.4□□□□□ -1.71
CMC4P56277 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.4□□□□□ -1.71
CMC4P56277 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.4□□□□□ -1.71
CMC4P56277 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.4□□□□□ -1.71
CMC4P56277 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.4□□□□□ -1.71
CMC4P56277 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.4□□□□□ -1.71
CMC4P56277 RN7SL269P-201ENST00000467795 305 ntBASIC4.4□□□□□ -1.71
CMC4P56277 AC090589.1-201ENST00000473109 362 ntBASIC4.4□□□□□ -1.71
CMC4P56277 RPL37P23-201ENST00000492641 294 ntBASIC4.4□□□□□ -1.71
CMC4P56277 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CMC4P56277 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.4□□□□□ -1.71
CMC4P56277 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.4□□□□□ -1.71
CMC4P56277 AC060775.1-201ENST00000518241 520 ntBASIC4.4□□□□□ -1.71
CMC4P56277 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.4□□□□□ -1.71
CMC4P56277 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.4□□□□□ -1.71
CMC4P56277 OR4A6P-201ENST00000534364 970 ntBASIC4.4□□□□□ -1.71
CMC4P56277 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.4□□□□□ -1.71
CMC4P56277 IGBP1P1-201ENST00000554337 1009 ntBASIC4.4□□□□□ -1.71
CMC4P56277 AL356801.1-201ENST00000559320 294 ntBASIC4.4□□□□□ -1.71
CMC4P56277 ZNF322P1-201ENST00000568013 1209 ntBASIC4.4□□□□□ -1.71
CMC4P56277 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CMC4P56277 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC4.4□□□□□ -1.71
CMC4P56277 AL021918.2-201ENST00000613415 194 ntBASIC4.4□□□□□ -1.71
CMC4P56277 MIR6071-201ENST00000616741 78 ntBASIC4.4□□□□□ -1.71
CMC4P56277 SNX18P12-201ENST00000624821 759 ntBASIC4.4□□□□□ -1.71
CMC4P56277 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.4□□□□□ -1.71
CMC4P56277 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
CMC4P56277 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.4□□□□□ -1.71
CMC4P56277 HSPD1P8-201ENST00000400121 1658 ntBASIC4.4□□□□□ -1.71
CMC4P56277 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
CMC4P56277 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CMC4P56277 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CMC4P56277 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
CMC4P56277 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CMC4P56277 AF287957.1-201ENST00000607368 1595 ntBASIC4.4□□□□□ -1.71
CMC4P56277 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
CMC4P56277 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.4□□□□□ -1.71
CMC4P56277 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
CMC4P56277 AC092724.1-201ENST00000624623 3397 ntBASIC4.39□□□□□ -1.71
CMC4P56277 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CMC4P56277 AC112243.1-201ENST00000623949 3851 ntBASIC4.39□□□□□ -1.71
CMC4P56277 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CMC4P56277 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CMC4P56277 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CMC4P56277 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CMC4P56277 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CMC4P56277 RNFT1P3-201ENST00000340898 1052 ntBASIC4.39□□□□□ -1.71
CMC4P56277 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CMC4P56277 GNG5P2-201ENST00000372054 207 ntBASIC4.39□□□□□ -1.71
CMC4P56277 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.39□□□□□ -1.71
CMC4P56277 EEF1B2P8-201ENST00000414101 671 ntBASIC4.39□□□□□ -1.71
CMC4P56277 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.39□□□□□ -1.71
CMC4P56277 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.39□□□□□ -1.71
CMC4P56277 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.39□□□□□ -1.71
CMC4P56277 NME1P1-201ENST00000420914 382 ntBASIC4.39□□□□□ -1.71
CMC4P56277 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms