Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF144AP50876 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF144AP50876 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF144AP50876 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF144AP50876 RPL12P32-201ENST00000484010 494 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF144AP50876 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RNF144AP50876 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF144AP50876 MTCO1P30-201ENST00000515244 580 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 SCARNA20.3-201ENST00000516913 131 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 IGHVII-22-1-201ENST00000517888 265 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF144AP50876 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF144AP50876 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF144AP50876 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF144AP50876 OR4A45P-201ENST00000529954 901 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF144AP50876 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF144AP50876 AC023080.1-201ENST00000551663 931 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF144AP50876 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF144AP50876 AC122134.1-201ENST00000565664 1104 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF144AP50876 AC015674.1-201ENST00000578482 267 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF144AP50876 AL035413.2-201ENST00000604801 525 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 TAS2R6P-201ENST00000605022 826 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF144AP50876 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF144AP50876 RBM22P6-201ENST00000611682 867 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 AL132821.1-201ENST00000616029 394 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF144AP50876 AP004607.9-201ENST00000618202 316 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 YWHAEP7-203ENST00000622054 312 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 AC006840.1-201ENST00000623069 542 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 AC114546.4-201ENST00000624413 369 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF144AP50876 DCAF13P3-201ENST00000561147 1334 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RNF144AP50876 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF144AP50876 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RNF144AP50876 GTF2IP1-202ENST00000614592 2047 ntBASIC7.42□□□□□ -1.22
RNF144AP50876 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF144AP50876 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF144AP50876 AC145138.1-201ENST00000512908 2851 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF144AP50876 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RNF144AP50876 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF144AP50876 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF144AP50876 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF144AP50876 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RNF144AP50876 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 MAPK10-347ENST00000641762 2856 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
RNF144AP50876 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RNF144AP50876 HMGB1P5-201ENST00000255320 642 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 RNA5SP71-201ENST00000362967 126 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 Y_RNA.86-201ENST00000363020 111 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 Y_RNA.138-201ENST00000363462 102 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 Y_RNA.144-201ENST00000363521 113 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF144AP50876 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF144AP50876 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 Y_RNA.409-201ENST00000383990 98 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 Y_RNA.431-201ENST00000384086 102 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 RNU6-878P-201ENST00000384578 110 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 RPS3AP36-201ENST00000398190 775 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AC109780.2-201ENST00000413467 845 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF144AP50876 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF144AP50876 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF144AP50876 AL356583.2-201ENST00000426536 280 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AL121776.1-201ENST00000429337 372 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AC097527.1-201ENST00000437031 530 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF144AP50876 Z80107.2-201ENST00000445127 392 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 ARPC3P5-201ENST00000448802 534 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 RPL31P15-201ENST00000449770 338 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AC091544.1-201ENST00000484702 348 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 RN7SL434P-201ENST00000495872 271 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF144AP50876 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.41□□□□□ -1.22
RNF144AP50876 GAPDHP44-201ENST00000513513 1007 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AC091982.1-201ENST00000518134 520 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.41□□□□□ -1.22
RNF144AP50876 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC7.41□□□□□ -1.22
RNF144AP50876 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF144AP50876 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.41□□□□□ -1.22
RNF144AP50876 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC7.41□□□□□ -1.22
RNF144AP50876 AC009729.1-201ENST00000548873 1133 ntBASIC7.41□□□□□ -1.22
RNF144AP50876 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF144AP50876 AC009997.1-201ENST00000557862 129 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms