Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AP001052.1-201ENST00000626421 99 ntBASIC6.21□□□□□ -1.42
HADHAP40939 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.21□□□□□ -1.42
HADHAP40939 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HADHAP40939 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.21□□□□□ -1.42
HADHAP40939 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HADHAP40939 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.21□□□□□ -1.42
HADHAP40939 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HADHAP40939 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HADHAP40939 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 MTCO1P7-201ENST00000419523 1542 ntBASIC6.2□□□□□ -1.42
HADHAP40939 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 AC005725.1-201ENST00000577346 2607 ntBASIC6.2□□□□□ -1.42
HADHAP40939 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
HADHAP40939 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HADHAP40939 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HADHAP40939 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.2□□□□□ -1.42
HADHAP40939 RNU6-564P-201ENST00000410983 104 ntBASIC6.2□□□□□ -1.42
HADHAP40939 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.2□□□□□ -1.42
HADHAP40939 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.2□□□□□ -1.42
HADHAP40939 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.2□□□□□ -1.42
HADHAP40939 AL354707.3-201ENST00000427308 331 ntBASIC6.2□□□□□ -1.42
HADHAP40939 MAPRE1P3-201ENST00000435438 796 ntBASIC6.2□□□□□ -1.42
HADHAP40939 OR3D1P-201ENST00000438288 955 ntBASIC6.2□□□□□ -1.42
HADHAP40939 BX679664.2-201ENST00000439282 283 ntBASIC6.2□□□□□ -1.42
HADHAP40939 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.2□□□□□ -1.42
HADHAP40939 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.2□□□□□ -1.42
HADHAP40939 GAPDHP23-201ENST00000444823 993 ntBASIC6.2□□□□□ -1.42
HADHAP40939 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 AC112187.1-201ENST00000455837 479 ntBASIC6.2□□□□□ -1.42
HADHAP40939 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 RARRES2P3-201ENST00000457739 473 ntBASIC6.2□□□□□ -1.42
HADHAP40939 OR7E22P-201ENST00000478335 1035 ntBASIC6.2□□□□□ -1.42
HADHAP40939 AC098799.1-201ENST00000504752 800 ntBASIC6.2□□□□□ -1.42
HADHAP40939 AC113367.2-201ENST00000505749 160 ntBASIC6.2□□□□□ -1.42
HADHAP40939 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.2□□□□□ -1.42
HADHAP40939 RFPL4AP3-201ENST00000515267 345 ntBASIC6.2□□□□□ -1.42
HADHAP40939 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 AC005000.1-201ENST00000536192 288 ntBASIC6.2□□□□□ -1.42
HADHAP40939 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.2□□□□□ -1.42
HADHAP40939 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 MIR4420-201ENST00000583944 77 ntBASIC6.2□□□□□ -1.42
HADHAP40939 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
HADHAP40939 AC125494.2-201ENST00000602431 657 ntBASIC6.2□□□□□ -1.42
HADHAP40939 AL591167.1-201ENST00000607321 456 ntBASIC6.2□□□□□ -1.42
HADHAP40939 AC012467.1-201ENST00000607740 256 ntBASIC6.2□□□□□ -1.42
HADHAP40939 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.2□□□□□ -1.42
HADHAP40939 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.2□□□□□ -1.42
HADHAP40939 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.2□□□□□ -1.42
HADHAP40939 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HADHAP40939 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 AL161912.4-201ENST00000623889 2468 ntBASIC6.2□□□□□ -1.42
HADHAP40939 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.2□□□□□ -1.42
HADHAP40939 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HADHAP40939 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HADHAP40939 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.19□□□□□ -1.42
HADHAP40939 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HADHAP40939 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
HADHAP40939 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HADHAP40939 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HADHAP40939 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HADHAP40939 RNU1-65P-201ENST00000363919 148 ntBASIC6.19□□□□□ -1.42
HADHAP40939 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HADHAP40939 MIR188-201ENST00000385034 86 ntBASIC6.19□□□□□ -1.42
HADHAP40939 AL121977.1-201ENST00000401636 979 ntBASIC6.19□□□□□ -1.42
HADHAP40939 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.19□□□□□ -1.42
HADHAP40939 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HADHAP40939 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
HADHAP40939 AL138787.1-202ENST00000437804 898 ntBASIC6.19□□□□□ -1.42
HADHAP40939 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.19□□□□□ -1.42
HADHAP40939 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.19□□□□□ -1.42
HADHAP40939 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.19□□□□□ -1.42
HADHAP40939 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.19□□□□□ -1.42
HADHAP40939 REG1CP-206ENST00000447469 496 ntBASIC6.19□□□□□ -1.42
HADHAP40939 RPL23AP60-201ENST00000450011 454 ntBASIC6.19□□□□□ -1.42
HADHAP40939 RN7SL352P-201ENST00000466002 277 ntBASIC6.19□□□□□ -1.42
HADHAP40939 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.19□□□□□ -1.42
HADHAP40939 CR383656.1-201ENST00000484916 377 ntBASIC6.19□□□□□ -1.42
HADHAP40939 RN7SL170P-201ENST00000487098 295 ntBASIC6.19□□□□□ -1.42
HADHAP40939 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.19□□□□□ -1.42
HADHAP40939 SNX18P25-201ENST00000510539 758 ntBASIC6.19□□□□□ -1.42
HADHAP40939 AC108103.1-201ENST00000511286 446 ntBASIC6.19□□□□□ -1.42
HADHAP40939 AC009879.1-201ENST00000520029 839 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms