Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXA9P31269 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXA9P31269 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXA9P31269 AOX3P-204ENST00000491025 2107 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA9P31269 AC090220.1-201ENST00000593078 1699 ntBASIC6.2□□□□□ -1.42
HOXA9P31269 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXA9P31269 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXA9P31269 AC005261.2-201ENST00000593427 4258 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXA9P31269 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 AC006511.3-201ENST00000624929 1783 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 MIR1178-201ENST00000408396 91 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 RN7SKP29-201ENST00000410957 272 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXA9P31269 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXA9P31269 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXA9P31269 SDC4P-201ENST00000453285 601 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 RPS23P6-201ENST00000466136 431 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 AC109481.1-201ENST00000509173 282 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 CYP4F27P-201ENST00000514557 494 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 RNU6-615P-201ENST00000516065 106 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 TPM3P3-201ENST00000521343 354 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXA9P31269 OR4H6P-201ENST00000563771 921 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXA9P31269 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 AL445670.1-201ENST00000618889 801 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 AC007683.2-201ENST00000624681 714 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 AC022919.1-201ENST00000624979 626 ntBASIC6.19□□□□□ -1.42
HOXA9P31269 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXA9P31269 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXA9P31269 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXA9P31269 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXA9P31269 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXA9P31269 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXA9P31269 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXA9P31269 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
HOXA9P31269 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 Z83820.1-201ENST00000456978 1499 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 SNORA70H-201ENST00000383910 135 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 SNORA70J-201ENST00000384182 135 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 RNA5SP251-201ENST00000410614 137 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXA9P31269 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 AL662874.1-201ENST00000426065 230 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXA9P31269 SPRYD7P1-201ENST00000443861 570 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 AC093166.4-201ENST00000457867 318 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
HOXA9P31269 OR7E157P-201ENST00000494376 911 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 EIF3LP3-201ENST00000495197 822 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 AC108693.1-201ENST00000496068 432 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 CCDC11P1-201ENST00000503137 1162 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 SNORA43.3-201ENST00000517240 103 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 OR7E158P-201ENST00000524483 910 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXA9P31269 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXA9P31269 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 DPPA2P4-201ENST00000563717 878 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXA9P31269 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXA9P31269 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXA9P31269 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 AP003789.1-201ENST00000617737 605 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 AC004836.1-201ENST00000623032 634 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 AC009120.7-201ENST00000623452 780 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms