Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
COL8A1P27658 NRBF2P2-201ENST00000413087 861 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC098592.2-201ENST00000413158 265 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 ATP5HP4-201ENST00000414313 475 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC6.94□□□□□ -1.3
COL8A1P27658 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.94□□□□□ -1.3
COL8A1P27658 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC6.94□□□□□ -1.3
COL8A1P27658 VN1R20P-201ENST00000425215 966 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.94□□□□□ -1.3
COL8A1P27658 AC099344.1-201ENST00000433548 492 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AL604028.2-201ENST00000437848 788 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC096632.2-201ENST00000438139 1239 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC239367.2-201ENST00000447309 705 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 LARP1BP2-201ENST00000486594 519 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.94□□□□□ -1.3
COL8A1P27658 AC010486.1-201ENST00000511793 424 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.94□□□□□ -1.3
COL8A1P27658 SNORA19.2-201ENST00000516013 114 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 Y_RNA.704-201ENST00000516851 102 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC105029.1-201ENST00000520250 669 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.94□□□□□ -1.3
COL8A1P27658 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.94□□□□□ -1.3
COL8A1P27658 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC6.94□□□□□ -1.3
COL8A1P27658 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.94□□□□□ -1.3
COL8A1P27658 AC009779.4-201ENST00000554248 611 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 COX6CP11-201ENST00000555293 229 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AL512360.1-201ENST00000555346 234 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.94□□□□□ -1.3
COL8A1P27658 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.94□□□□□ -1.3
COL8A1P27658 MIR3149-201ENST00000584629 83 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC6.94□□□□□ -1.3
COL8A1P27658 GMFG-204ENST00000595636 487 ntTSL 2 BASIC6.94□□□□□ -1.3
COL8A1P27658 AC024085.1-201ENST00000604299 432 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AL161729.4-201ENST00000604650 476 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 MEMO1P5-201ENST00000604810 406 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 Z95327.3-201ENST00000610385 572 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC243756.2-201ENST00000618406 463 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AL139089.1-201ENST00000620372 975 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.94□□□□□ -1.3
COL8A1P27658 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC6.94□□□□□ -1.3
COL8A1P27658 MTND4LP32-201ENST00000636111 270 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 AC243725.1-201ENST00000637164 436 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 KRT7-214ENST00000638501 398 ntTSL 5 BASIC6.94□□□□□ -1.3
COL8A1P27658 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL8A1P27658 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
COL8A1P27658 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL8A1P27658 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.94□□□□□ -1.3
COL8A1P27658 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC6.94□□□□□ -1.3
COL8A1P27658 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL8A1P27658 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 ZNF887P-201ENST00000431363 1407 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 RNU6-660P-201ENST00000364566 109 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 SNORA33.2-201ENST00000365413 134 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 SNORD15A-201ENST00000384214 148 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 RNU6-549P-201ENST00000384433 107 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 MT-TG-201ENST00000387429 68 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 U3.18-201ENST00000390880 216 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 GLRX3P2-201ENST00000405027 1038 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 LARP1P1-201ENST00000407692 292 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 RN7SKP251-201ENST00000410830 314 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 XKRYP4-201ENST00000414395 483 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.93□□□□□ -1.3
COL8A1P27658 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC6.93□□□□□ -1.3
COL8A1P27658 FCF1P2-201ENST00000415284 583 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.93□□□□□ -1.3
COL8A1P27658 FBP2P1-202ENST00000424473 530 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AL358176.2-201ENST00000425769 204 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms