Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.97□□□□□ -1.45
CDH3P22223 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH3P22223 AL591167.1-201ENST00000607321 456 ntBASIC5.97□□□□□ -1.45
CDH3P22223 AC092266.1-201ENST00000610958 165 ntBASIC5.97□□□□□ -1.45
CDH3P22223 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.97□□□□□ -1.45
CDH3P22223 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH3P22223 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH3P22223 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH3P22223 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH3P22223 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDH3P22223 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CDH3P22223 AC109446.4-201ENST00000623235 2755 ntBASIC5.96□□□□□ -1.45
CDH3P22223 AC068870.3-201ENST00000625077 2536 ntBASIC5.96□□□□□ -1.45
CDH3P22223 AL353763.1-201ENST00000624467 1628 ntBASIC5.96□□□□□ -1.45
CDH3P22223 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CDH3P22223 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CDH3P22223 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDH3P22223 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
CDH3P22223 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.96□□□□□ -1.45
CDH3P22223 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.96□□□□□ -1.46
CDH3P22223 AC125336.1-201ENST00000508893 2827 ntBASIC5.96□□□□□ -1.46
CDH3P22223 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH3P22223 LYARP1-201ENST00000436977 1501 ntBASIC5.96□□□□□ -1.46
CDH3P22223 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH3P22223 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CDH3P22223 RNU1-134P-201ENST00000362935 165 ntBASIC5.96□□□□□ -1.46
CDH3P22223 SNORA43.1-201ENST00000364863 140 ntBASIC5.96□□□□□ -1.46
CDH3P22223 SNORA51.9-201ENST00000384295 124 ntBASIC5.96□□□□□ -1.46
CDH3P22223 RNU11-6P-201ENST00000391127 133 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AC004386.1-201ENST00000393214 761 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AL132875.1-201ENST00000403623 949 ntBASIC5.96□□□□□ -1.46
CDH3P22223 MIR1282-201ENST00000408865 101 ntBASIC5.96□□□□□ -1.46
CDH3P22223 RN7SKP17-201ENST00000411242 351 ntBASIC5.96□□□□□ -1.46
CDH3P22223 HMGA1P8-201ENST00000414130 321 ntBASIC5.96□□□□□ -1.46
CDH3P22223 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH3P22223 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH3P22223 CYP4F30P-202ENST00000420048 405 ntBASIC5.96□□□□□ -1.46
CDH3P22223 KCTD9P1-201ENST00000430462 1167 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 RNU6-775P-201ENST00000459318 96 ntBASIC5.96□□□□□ -1.46
CDH3P22223 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 PRMT5P1-201ENST00000514351 598 ntBASIC5.96□□□□□ -1.46
CDH3P22223 SNORA70.11-201ENST00000515987 138 ntBASIC5.96□□□□□ -1.46
CDH3P22223 SNORA70.13-201ENST00000516116 138 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 AC021269.1-201ENST00000526860 705 ntBASIC5.96□□□□□ -1.46
CDH3P22223 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH3P22223 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH3P22223 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 AC090888.3-201ENST00000558917 509 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH3P22223 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH3P22223 AC002069.2-201ENST00000603580 883 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AC015849.6-201ENST00000605454 474 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH3P22223 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH3P22223 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AC022960.2-201ENST00000616300 666 ntBASIC5.96□□□□□ -1.46
CDH3P22223 AC004801.6-201ENST00000616571 978 ntBASIC5.96□□□□□ -1.46
CDH3P22223 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH3P22223 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CDH3P22223 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.96□□□□□ -1.46
CDH3P22223 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH3P22223 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH3P22223 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH3P22223 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH3P22223 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
CDH3P22223 MIPEPP2-201ENST00000422560 1819 ntBASIC5.95□□□□□ -1.46
CDH3P22223 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CDH3P22223 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH3P22223 MTHFD2P5-201ENST00000320415 844 ntBASIC5.95□□□□□ -1.46
CDH3P22223 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH3P22223 SNORA21-201ENST00000362423 132 ntBASIC5.95□□□□□ -1.46
CDH3P22223 RNA5SP110-201ENST00000362638 115 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms