Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.4□□□□□ -1.38
ATF4P18848 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.4□□□□□ -1.38
ATF4P18848 MRRFP1-201ENST00000435941 1675 ntBASIC6.4□□□□□ -1.38
ATF4P18848 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
ATF4P18848 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.4□□□□□ -1.38
ATF4P18848 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC6.4□□□□□ -1.38
ATF4P18848 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ATF4P18848 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ATF4P18848 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 PIGPP2-201ENST00000411569 458 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC068533.2-201ENST00000411872 306 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC6.4□□□□□ -1.38
ATF4P18848 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.4□□□□□ -1.38
ATF4P18848 RPS3AP44-201ENST00000425466 790 ntBASIC6.4□□□□□ -1.38
ATF4P18848 OR52S1P-201ENST00000427016 937 ntBASIC6.4□□□□□ -1.38
ATF4P18848 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.4□□□□□ -1.38
ATF4P18848 FAF2P1-201ENST00000429974 1298 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ATF4P18848 AP000936.2-201ENST00000447151 681 ntBASIC6.4□□□□□ -1.38
ATF4P18848 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 VN1R32P-201ENST00000452234 905 ntBASIC6.4□□□□□ -1.38
ATF4P18848 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC6.4□□□□□ -1.38
ATF4P18848 TRBV21-1-201ENST00000453262 348 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC096915.1-201ENST00000456185 512 ntBASIC6.4□□□□□ -1.38
ATF4P18848 RNU6-956P-201ENST00000458868 103 ntBASIC6.4□□□□□ -1.38
ATF4P18848 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 RN7SL263P-201ENST00000467969 290 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.4□□□□□ -1.38
ATF4P18848 AC116337.2-201ENST00000477662 156 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATF4P18848 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 LTV1P1-201ENST00000510683 1237 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC113191.1-201ENST00000517759 403 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.4□□□□□ -1.38
ATF4P18848 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 HSPE1P2-201ENST00000554777 306 ntBASIC6.4□□□□□ -1.38
ATF4P18848 TRAV15-201ENST00000556680 249 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AL132640.1-201ENST00000559594 619 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC006362.1-201ENST00000567392 174 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.4□□□□□ -1.38
ATF4P18848 AC007952.7-201ENST00000583141 757 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC087393.3-201ENST00000584971 166 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 AC095055.1-201ENST00000603472 1113 ntBASIC6.4□□□□□ -1.38
ATF4P18848 MTCYBP22-201ENST00000603788 447 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC092354.1-201ENST00000606057 376 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC002059.1-201ENST00000608014 477 ntBASIC6.4□□□□□ -1.38
ATF4P18848 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.4□□□□□ -1.38
ATF4P18848 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 AC010722.1-202ENST00000618284 573 ntTSL 4 BASIC6.4□□□□□ -1.38
ATF4P18848 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC009878.1-201ENST00000621819 340 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC025287.2-201ENST00000621911 668 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC015804.1-201ENST00000622935 435 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC135068.5-201ENST00000624197 983 ntBASIC6.4□□□□□ -1.38
ATF4P18848 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.4□□□□□ -1.38
ATF4P18848 AC087565.3-203ENST00000641018 837 ntBASIC6.4□□□□□ -1.38
ATF4P18848 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
ATF4P18848 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.4□□□□□ -1.39
ATF4P18848 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.4□□□□□ -1.39
ATF4P18848 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
ATF4P18848 AC007842.1-201ENST00000597336 2039 ntBASIC6.4□□□□□ -1.39
ATF4P18848 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATF4P18848 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC6.4□□□□□ -1.39
ATF4P18848 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.4□□□□□ -1.39
ATF4P18848 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATF4P18848 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATF4P18848 WDR95P-201ENST00000425638 1542 ntBASIC6.4□□□□□ -1.39
ATF4P18848 AL359263.1-201ENST00000441188 2796 ntBASIC6.4□□□□□ -1.39
ATF4P18848 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.4□□□□□ -1.39
ATF4P18848 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
ATF4P18848 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
ATF4P18848 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC6.39□□□□□ -1.39
ATF4P18848 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATF4P18848 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATF4P18848 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATF4P18848 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATF4P18848 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.39□□□□□ -1.39
ATF4P18848 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATF4P18848 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
ATF4P18848 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.39□□□□□ -1.39
ATF4P18848 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.39□□□□□ -1.39
ATF4P18848 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC6.39□□□□□ -1.39
ATF4P18848 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ATF4P18848 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ATF4P18848 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATF4P18848 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
ATF4P18848 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms