Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
MMP3P08254 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.56□□□□□ -1.36
MMP3P08254 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
MMP3P08254 AC008957.3-201ENST00000624112 2242 ntBASIC6.56□□□□□ -1.36
MMP3P08254 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MMP3P08254 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MMP3P08254 MIR1178-201ENST00000408396 91 ntBASIC6.56□□□□□ -1.36
MMP3P08254 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP3P08254 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP3P08254 AC007562.1-201ENST00000421819 517 ntBASIC6.56□□□□□ -1.36
MMP3P08254 Z84478.1-201ENST00000438230 1219 ntBASIC6.56□□□□□ -1.36
MMP3P08254 AC023274.2-201ENST00000445264 521 ntBASIC6.56□□□□□ -1.36
MMP3P08254 AC068522.1-201ENST00000482895 345 ntBASIC6.56□□□□□ -1.36
MMP3P08254 OR7E157P-201ENST00000494376 911 ntBASIC6.56□□□□□ -1.36
MMP3P08254 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.56□□□□□ -1.36
MMP3P08254 AC008638.1-201ENST00000506035 866 ntBASIC6.56□□□□□ -1.36
MMP3P08254 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
MMP3P08254 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP3P08254 RNU6-615P-201ENST00000516065 106 ntBASIC6.56□□□□□ -1.36
MMP3P08254 IGKV2-18-201ENST00000522607 343 ntBASIC6.56□□□□□ -1.36
MMP3P08254 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP3P08254 HMGB1P42-201ENST00000532126 553 ntBASIC6.56□□□□□ -1.36
MMP3P08254 AC016180.1-201ENST00000567945 403 ntBASIC6.56□□□□□ -1.36
MMP3P08254 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP3P08254 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP3P08254 AC022960.2-201ENST00000616300 666 ntBASIC6.56□□□□□ -1.36
MMP3P08254 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.56□□□□□ -1.36
MMP3P08254 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.56□□□□□ -1.36
MMP3P08254 AC243960.7-201ENST00000623532 707 ntBASIC6.56□□□□□ -1.36
MMP3P08254 CU639417.4-201ENST00000623928 207 ntBASIC6.56□□□□□ -1.36
MMP3P08254 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
MMP3P08254 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 AL669831.5-218ENST00000591702 1873 ntBASIC6.56□□□□□ -1.36
MMP3P08254 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.55□□□□□ -1.36
MMP3P08254 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.55□□□□□ -1.36
MMP3P08254 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.55□□□□□ -1.36
MMP3P08254 AP000641.1-201ENST00000531988 1639 ntBASIC6.55□□□□□ -1.36
MMP3P08254 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
MMP3P08254 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.55□□□□□ -1.36
MMP3P08254 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 AL022331.1-201ENST00000429025 477 ntBASIC6.55□□□□□ -1.36
MMP3P08254 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.55□□□□□ -1.36
MMP3P08254 DEFA9P-201ENST00000433042 285 ntBASIC6.55□□□□□ -1.36
MMP3P08254 AL663074.2-201ENST00000440621 479 ntBASIC6.55□□□□□ -1.36
MMP3P08254 AC079922.1-201ENST00000443291 359 ntBASIC6.55□□□□□ -1.36
MMP3P08254 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 ACA64.4-201ENST00000459070 127 ntBASIC6.55□□□□□ -1.36
MMP3P08254 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 DUTP7-201ENST00000507982 486 ntBASIC6.55□□□□□ -1.36
MMP3P08254 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.55□□□□□ -1.36
MMP3P08254 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 IGBP1P1-201ENST00000554337 1009 ntBASIC6.55□□□□□ -1.36
MMP3P08254 EIF1AXP2-201ENST00000555940 413 ntBASIC6.55□□□□□ -1.36
MMP3P08254 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.55□□□□□ -1.36
MMP3P08254 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.55□□□□□ -1.36
MMP3P08254 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.55□□□□□ -1.36
MMP3P08254 OR7E18P-201ENST00000592589 702 ntBASIC6.55□□□□□ -1.36
MMP3P08254 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.55□□□□□ -1.36
MMP3P08254 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.55□□□□□ -1.36
MMP3P08254 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.55□□□□□ -1.36
MMP3P08254 AC103798.2-201ENST00000624292 632 ntBASIC6.55□□□□□ -1.36
MMP3P08254 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.55□□□□□ -1.36
MMP3P08254 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.55□□□□□ -1.36
MMP3P08254 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.55□□□□□ -1.36
MMP3P08254 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 AC009831.5-201ENST00000624000 3189 ntBASIC6.55□□□□□ -1.36
MMP3P08254 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 AC104162.1-201ENST00000430831 2382 ntBASIC6.55□□□□□ -1.36
MMP3P08254 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.55□□□□□ -1.36
MMP3P08254 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MMP3P08254 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.54□□□□□ -1.36
MMP3P08254 Z83820.1-201ENST00000456978 1499 ntBASIC6.54□□□□□ -1.36
MMP3P08254 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 SNORD8-201ENST00000363915 110 ntBASIC6.54□□□□□ -1.36
MMP3P08254 AL391422.1-201ENST00000402155 436 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms