Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AK5-208ENST00000478255 556 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 RN7SL273P-201ENST00000481561 299 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 SNORA70.20-201ENST00000516848 126 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 TPM3P3-201ENST00000521343 354 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC112191.2-201ENST00000522428 333 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 OR4R2P-201ENST00000530815 597 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC006530.1-201ENST00000555980 571 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 MTND4LP25-201ENST00000570218 163 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC068313.1-201ENST00000604028 1008 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC018754.1-201ENST00000607486 925 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 SHQ1P1-201ENST00000437111 1544 ntBASIC7.09□□□□□ -1.27
HLA-DOAP06340 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
HLA-DOAP06340 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HLA-DOAP06340 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
HLA-DOAP06340 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.28
HLA-DOAP06340 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-DOAP06340 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-DOAP06340 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC079777.1-201ENST00000623836 1953 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-DOAP06340 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-DOAP06340 MIR375-201ENST00000362103 64 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-DOAP06340 RN7SKP286-201ENST00000410894 299 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 MTND4P11-201ENST00000417020 1058 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 BX119321.1-201ENST00000428912 797 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC079922.1-201ENST00000443291 359 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 RPS7P3-201ENST00000443360 580 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 RPL36AP39-201ENST00000445859 318 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC068522.1-201ENST00000482895 345 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 GAPDHP71-201ENST00000511530 1003 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AL136520.1-202ENST00000555494 763 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC004808.2-201ENST00000627965 773 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-DOAP06340 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC016583.1-201ENST00000624221 2431 ntBASIC7.08□□□□□ -1.28
HLA-DOAP06340 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HLA-DOAP06340 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-DOAP06340 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-DOAP06340 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-DOAP06340 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-DOAP06340 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 AL355143.1-201ENST00000407101 841 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 RN7SKP166-201ENST00000410812 305 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 SDHDP6-201ENST00000414693 480 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 PTCD2P2-201ENST00000415579 1095 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 GTF3AP1-201ENST00000416942 1004 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 RPL36P18-201ENST00000419316 318 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 RPL17P35-201ENST00000432217 549 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms