Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC024085.1-201ENST00000604299 432 ntBASIC5.7□□□□□ -1.5
SNX3O60493 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX3O60493 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX3O60493 AC107308.1-201ENST00000615897 301 ntBASIC5.7□□□□□ -1.5
SNX3O60493 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX3O60493 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX3O60493 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX3O60493 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX3O60493 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX3O60493 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX3O60493 MFSD8-219ENST00000641228 2559 ntBASIC5.69□□□□□ -1.5
SNX3O60493 AC018717.1-201ENST00000457712 1505 ntBASIC5.69□□□□□ -1.5
SNX3O60493 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX3O60493 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNX3O60493 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.69□□□□□ -1.5
SNX3O60493 AL137141.1-201ENST00000624622 4836 ntBASIC5.69□□□□□ -1.5
SNX3O60493 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
SNX3O60493 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX3O60493 AC092681.1-201ENST00000297369 291 ntBASIC5.69□□□□□ -1.5
SNX3O60493 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX3O60493 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNX3O60493 AL589994.1-201ENST00000404962 340 ntBASIC5.69□□□□□ -1.5
SNX3O60493 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.69□□□□□ -1.5
SNX3O60493 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 RBMY2JP-201ENST00000425544 1059 ntBASIC5.69□□□□□ -1.5
SNX3O60493 PHBP4-201ENST00000437447 837 ntBASIC5.69□□□□□ -1.5
SNX3O60493 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX3O60493 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.69□□□□□ -1.5
SNX3O60493 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.69□□□□□ -1.5
SNX3O60493 RN7SL413P-201ENST00000482700 297 ntBASIC5.69□□□□□ -1.5
SNX3O60493 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX3O60493 MAST4-IT1-201ENST00000514241 658 ntBASIC5.69□□□□□ -1.5
SNX3O60493 RNU6-943P-201ENST00000516960 98 ntBASIC5.69□□□□□ -1.5
SNX3O60493 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.69□□□□□ -1.5
SNX3O60493 AC079064.1-201ENST00000528365 362 ntBASIC5.69□□□□□ -1.5
SNX3O60493 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX3O60493 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SNX3O60493 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.69□□□□□ -1.5
SNX3O60493 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX3O60493 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX3O60493 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 AP001823.1-201ENST00000604056 1003 ntBASIC5.69□□□□□ -1.5
SNX3O60493 Z93930.3-201ENST00000607919 749 ntBASIC5.69□□□□□ -1.5
SNX3O60493 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.69□□□□□ -1.5
SNX3O60493 AL391597.1-201ENST00000618707 694 ntBASIC5.69□□□□□ -1.5
SNX3O60493 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
SNX3O60493 MTCO1P1-201ENST00000624263 1081 ntBASIC5.69□□□□□ -1.5
SNX3O60493 AL357562.1-201ENST00000624911 609 ntBASIC5.69□□□□□ -1.5
SNX3O60493 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX3O60493 LINC02019-201ENST00000608605 2060 ntBASIC5.69□□□□□ -1.5
SNX3O60493 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNX3O60493 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.69□□□□□ -1.5
SNX3O60493 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.69□□□□□ -1.5
SNX3O60493 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX3O60493 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX3O60493 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SNX3O60493 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX3O60493 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX3O60493 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX3O60493 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SNX3O60493 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX3O60493 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
SNX3O60493 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX3O60493 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNX3O60493 AL121886.1-201ENST00000358609 435 ntBASIC5.68□□□□□ -1.5
SNX3O60493 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX3O60493 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNX3O60493 AC226101.1-201ENST00000401483 387 ntBASIC5.68□□□□□ -1.5
SNX3O60493 AL353133.1-201ENST00000407695 401 ntBASIC5.68□□□□□ -1.5
SNX3O60493 AC096921.1-201ENST00000411661 375 ntBASIC5.68□□□□□ -1.5
SNX3O60493 RPL12P12-201ENST00000424633 501 ntBASIC5.68□□□□□ -1.5
SNX3O60493 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX3O60493 AC094019.1-201ENST00000434678 472 ntBASIC5.68□□□□□ -1.5
SNX3O60493 PCBP2P1-201ENST00000437262 977 ntBASIC5.68□□□□□ -1.5
SNX3O60493 OR2L9P-201ENST00000444456 913 ntBASIC5.68□□□□□ -1.5
SNX3O60493 COX4I1P2-201ENST00000447446 547 ntBASIC5.68□□□□□ -1.5
SNX3O60493 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX3O60493 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SNX3O60493 AC021193.1-201ENST00000511607 420 ntBASIC5.68□□□□□ -1.5
SNX3O60493 SNORA48.9-201ENST00000516419 162 ntBASIC5.68□□□□□ -1.5
SNX3O60493 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC5.68□□□□□ -1.5
SNX3O60493 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
SNX3O60493 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX3O60493 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX3O60493 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX3O60493 AC010287.1-201ENST00000566916 357 ntBASIC5.68□□□□□ -1.5
SNX3O60493 RPL7AP69-201ENST00000595306 806 ntBASIC5.68□□□□□ -1.5
SNX3O60493 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX3O60493 AC096586.2-201ENST00000610260 441 ntBASIC5.68□□□□□ -1.5
SNX3O60493 AC004839.1-201ENST00000610269 501 ntBASIC5.68□□□□□ -1.5
SNX3O60493 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX3O60493 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX3O60493 HSPA8P14-201ENST00000552265 1805 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms