Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 P2RY10P2-201ENST00000416730 913 ntBASIC9.99□□□□□ -0.81
CUX2O14529 GTF2IP2-201ENST00000424290 697 ntBASIC9.99□□□□□ -0.81
CUX2O14529 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC9.99□□□□□ -0.81
CUX2O14529 AC100784.1-201ENST00000522790 310 ntBASIC9.99□□□□□ -0.81
CUX2O14529 OR6M2P-201ENST00000529831 871 ntBASIC9.99□□□□□ -0.81
CUX2O14529 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CUX2O14529 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
CUX2O14529 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC9.99□□□□□ -0.81
CUX2O14529 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC9.99□□□□□ -0.81
CUX2O14529 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC9.99□□□□□ -0.81
CUX2O14529 AC087385.3-201ENST00000620477 187 ntBASIC9.99□□□□□ -0.81
CUX2O14529 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC9.99□□□□□ -0.81
CUX2O14529 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CUX2O14529 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CUX2O14529 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
CUX2O14529 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CUX2O14529 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
CUX2O14529 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC9.99□□□□□ -0.81
CUX2O14529 RAD17P2-201ENST00000451754 1977 ntBASIC9.99□□□□□ -0.81
CUX2O14529 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC9.99□□□□□ -0.81
CUX2O14529 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CUX2O14529 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CUX2O14529 AC011504.1-201ENST00000623331 4103 ntBASIC9.98□□□□□ -0.81
CUX2O14529 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CUX2O14529 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
CUX2O14529 TPT1-204ENST00000379060 764 ntTSL 5 BASIC9.98□□□□□ -0.81
CUX2O14529 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC9.98□□□□□ -0.81
CUX2O14529 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC9.98□□□□□ -0.81
CUX2O14529 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC9.98□□□□□ -0.81
CUX2O14529 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC9.98□□□□□ -0.81
CUX2O14529 AC009120.1-201ENST00000493458 473 ntBASIC9.98□□□□□ -0.81
CUX2O14529 AC093824.1-201ENST00000508796 343 ntBASIC9.98□□□□□ -0.81
CUX2O14529 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC9.98□□□□□ -0.81
CUX2O14529 AL445647.2-201ENST00000615170 130 ntBASIC9.98□□□□□ -0.81
CUX2O14529 AP002991.2-201ENST00000623807 2801 ntBASIC9.98□□□□□ -0.81
CUX2O14529 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC9.98□□□□□ -0.81
CUX2O14529 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CUX2O14529 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CUX2O14529 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
CUX2O14529 AC008937.3-201ENST00000606813 1700 ntBASIC9.98□□□□□ -0.81
CUX2O14529 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CUX2O14529 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
CUX2O14529 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
CUX2O14529 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CUX2O14529 RNU1-24P-201ENST00000364285 165 ntBASIC9.98□□□□□ -0.81
CUX2O14529 SNX10-203ENST00000409367 746 ntTSL 5 BASIC9.98□□□□□ -0.81
CUX2O14529 AC093162.1-201ENST00000419682 124 ntBASIC9.98□□□□□ -0.81
CUX2O14529 AC097721.1-201ENST00000427150 1253 ntBASIC9.98□□□□□ -0.81
CUX2O14529 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC9.98□□□□□ -0.81
CUX2O14529 AC083795.1-201ENST00000491760 320 ntBASIC9.98□□□□□ -0.81
CUX2O14529 BNIP3P5-201ENST00000562290 498 ntBASIC9.98□□□□□ -0.81
CUX2O14529 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC9.98□□□□□ -0.81
CUX2O14529 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.98□□□□□ -0.81
CUX2O14529 AL109618.2-201ENST00000605527 211 ntBASIC9.98□□□□□ -0.81
CUX2O14529 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC9.98□□□□□ -0.81
CUX2O14529 AC024255.1-201ENST00000614376 102 ntBASIC9.98□□□□□ -0.81
CUX2O14529 AL390318.1-201ENST00000624564 687 ntBASIC9.98□□□□□ -0.81
CUX2O14529 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CUX2O14529 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
CUX2O14529 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CUX2O14529 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
CUX2O14529 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
CUX2O14529 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CUX2O14529 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CUX2O14529 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CUX2O14529 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9.97□□□□□ -0.81
CUX2O14529 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CUX2O14529 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC9.97□□□□□ -0.81
CUX2O14529 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
CUX2O14529 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
CUX2O14529 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CUX2O14529 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CUX2O14529 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
CUX2O14529 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
CUX2O14529 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CUX2O14529 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CUX2O14529 RPL32P3-201ENST00000359025 275 ntBASIC9.97□□□□□ -0.81
CUX2O14529 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC9.97□□□□□ -0.81
CUX2O14529 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC9.97□□□□□ -0.81
CUX2O14529 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC9.97□□□□□ -0.81
CUX2O14529 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC9.97□□□□□ -0.81
CUX2O14529 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC9.97□□□□□ -0.81
CUX2O14529 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC9.97□□□□□ -0.81
CUX2O14529 IGHVIII-2-1-201ENST00000518843 291 ntBASIC9.97□□□□□ -0.81
CUX2O14529 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC9.97□□□□□ -0.81
CUX2O14529 AL139099.4-201ENST00000614802 114 ntBASIC9.97□□□□□ -0.81
CUX2O14529 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC9.97□□□□□ -0.81
CUX2O14529 OR11H2-202ENST00000641517 1085 ntBASIC9.97□□□□□ -0.81
CUX2O14529 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.97□□□□□ -0.81
CUX2O14529 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CUX2O14529 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC9.96□□□□□ -0.81
CUX2O14529 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.96□□□□□ -0.81
CUX2O14529 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CUX2O14529 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.96□□□□□ -0.81
CUX2O14529 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC9.96□□□□□ -0.81
CUX2O14529 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC9.96□□□□□ -0.81
CUX2O14529 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CUX2O14529 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CUX2O14529 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
CUX2O14529 AC013488.1-201ENST00000526618 1838 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms