Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CXADRP3-202ENST00000617265 1100 ntBASIC6.34□□□□□ -1.39
O00370 AC245014.3-201ENST00000618589 347 ntBASIC6.34□□□□□ -1.39
O00370 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
O00370 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.34□□□□□ -1.4
O00370 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.34□□□□□ -1.4
O00370 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
O00370 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
O00370 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.33□□□□□ -1.4
O00370 SAMM50P1-201ENST00000455403 1399 ntBASIC6.33□□□□□ -1.4
O00370 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
O00370 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.33□□□□□ -1.4
O00370 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.33□□□□□ -1.4
O00370 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.33□□□□□ -1.4
O00370 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 SNORD1C-201ENST00000363315 78 ntBASIC6.33□□□□□ -1.4
O00370 RNA5SP433-201ENST00000364491 114 ntBASIC6.33□□□□□ -1.4
O00370 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.33□□□□□ -1.4
O00370 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
O00370 VN1R12P-201ENST00000403778 876 ntBASIC6.33□□□□□ -1.4
O00370 AL354890.1-201ENST00000413730 346 ntBASIC6.33□□□□□ -1.4
O00370 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.33□□□□□ -1.4
O00370 AC099677.3-201ENST00000427081 395 ntBASIC6.33□□□□□ -1.4
O00370 AC110602.1-201ENST00000437414 318 ntBASIC6.33□□□□□ -1.4
O00370 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.33□□□□□ -1.4
O00370 CUBNP2-201ENST00000443534 1139 ntBASIC6.33□□□□□ -1.4
O00370 BMS1P10-201ENST00000443754 1120 ntBASIC6.33□□□□□ -1.4
O00370 GEMIN2P1-201ENST00000454246 752 ntBASIC6.33□□□□□ -1.4
O00370 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.33□□□□□ -1.4
O00370 AC008629.2-201ENST00000503783 483 ntBASIC6.33□□□□□ -1.4
O00370 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.33□□□□□ -1.4
O00370 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.33□□□□□ -1.4
O00370 RNU6-1334P-201ENST00000516032 105 ntBASIC6.33□□□□□ -1.4
O00370 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.33□□□□□ -1.4
O00370 AC005363.1-201ENST00000530779 351 ntBASIC6.33□□□□□ -1.4
O00370 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.33□□□□□ -1.4
O00370 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.33□□□□□ -1.4
O00370 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.33□□□□□ -1.4
O00370 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.33□□□□□ -1.4
O00370 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.33□□□□□ -1.4
O00370 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.33□□□□□ -1.4
O00370 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.33□□□□□ -1.4
O00370 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.33□□□□□ -1.4
O00370 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.33□□□□□ -1.4
O00370 AL021918.2-201ENST00000613415 194 ntBASIC6.33□□□□□ -1.4
O00370 AL355974.3-201ENST00000617383 467 ntBASIC6.33□□□□□ -1.4
O00370 RNA5SP439-201ENST00000617595 124 ntBASIC6.33□□□□□ -1.4
O00370 AC024884.1-201ENST00000620583 399 ntBASIC6.33□□□□□ -1.4
O00370 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.33□□□□□ -1.4
O00370 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.33□□□□□ -1.4
O00370 THAP12P9-201ENST00000503971 2360 ntBASIC6.33□□□□□ -1.4
O00370 AL161756.3-201ENST00000641216 2071 ntBASIC6.33□□□□□ -1.4
O00370 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
O00370 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.32□□□□□ -1.4
O00370 AC130360.2-201ENST00000533477 1556 ntBASIC6.32□□□□□ -1.4
O00370 CASC19-260ENST00000641828 2001 ntBASIC6.32□□□□□ -1.4
O00370 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
O00370 SELENOWP1-201ENST00000322792 252 ntBASIC6.32□□□□□ -1.4
O00370 RN7SKP275-201ENST00000364626 301 ntBASIC6.32□□□□□ -1.4
O00370 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
O00370 OR7E156P-201ENST00000400303 464 ntBASIC6.32□□□□□ -1.4
O00370 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.32□□□□□ -1.4
O00370 AL445928.1-201ENST00000435545 222 ntBASIC6.32□□□□□ -1.4
O00370 KRT8P51-201ENST00000438938 274 ntBASIC6.32□□□□□ -1.4
O00370 PCNPP2-201ENST00000441651 455 ntBASIC6.32□□□□□ -1.4
O00370 RN7SL284P-201ENST00000498823 275 ntBASIC6.32□□□□□ -1.4
O00370 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.32□□□□□ -1.4
O00370 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.32□□□□□ -1.4
O00370 AP003396.4-201ENST00000527574 265 ntBASIC6.32□□□□□ -1.4
O00370 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 AC090826.1-203ENST00000569235 490 ntBASIC6.32□□□□□ -1.4
O00370 AC060766.1-201ENST00000590824 627 ntBASIC6.32□□□□□ -1.4
O00370 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.32□□□□□ -1.4
O00370 AL136131.3-201ENST00000607600 188 ntBASIC6.32□□□□□ -1.4
O00370 MIR6071-201ENST00000616741 78 ntBASIC6.32□□□□□ -1.4
O00370 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.32□□□□□ -1.4
O00370 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.32□□□□□ -1.4
O00370 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.32□□□□□ -1.4
O00370 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
O00370 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.32□□□□□ -1.4
O00370 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms